Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3227

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,720,387	+		Rru_A3226	0.39	-0.0
3,720,388	-		Rru_A3226	0.39	+0.2
3,720,388	-		Rru_A3226	0.39	+0.5
3,720,388	-		Rru_A3226	0.39	+0.9
3,720,414	+		Rru_A3226	0.42	-1.0
3,720,414	+		Rru_A3226	0.42	-0.0
3,720,414	+		Rru_A3226	0.42	+1.0
3,720,414	+		Rru_A3226	0.42	-0.0
3,720,414	+		Rru_A3226	0.42	-0.0
3,720,414	+		Rru_A3226	0.42	-0.0
3,720,414	+		Rru_A3226	0.42	-0.0
3,720,414	+		Rru_A3226	0.42	+0.6
3,720,415	-		Rru_A3226	0.43	+0.1
3,720,415	-		Rru_A3226	0.43	-0.4
3,720,415	-		Rru_A3226	0.43	-0.0
3,720,465	+		Rru_A3226	0.49	+0.5
3,720,465	+		Rru_A3226	0.49	-0.0
3,720,712	-		Rru_A3226	0.81	+0.5
3,720,735	+		Rru_A3226	0.84	-1.6
3,720,735	+		Rru_A3226	0.84	+0.7
3,720,736	-		Rru_A3226	0.84	-1.0
3,720,736	-		Rru_A3226	0.84	-1.0
3,720,736	-		Rru_A3226	0.84	-0.5
3,720,736	-		Rru_A3226	0.84	-0.5
3,720,736	-		Rru_A3226	0.84	-0.0
3,720,772	-		Rru_A3226	0.89	+0.1
3,720,772	-		Rru_A3226	0.89	+0.0
3,720,859	+				+0.4
3,720,859	+				+1.3
3,720,859	+				+0.6
3,720,859	+				-0.0
3,720,859	+				+0.6
3,720,859	+				-0.0
3,720,860	-				-0.0
3,720,860	-				+0.2
3,720,860	-				-1.0
3,720,860	-				-1.0
3,720,860	-				-0.0
3,720,939	-				-1.6
3,721,005	+				+1.1
3,721,138	+				-0.0
3,721,139	-				+0.7
3,721,139	-				-0.0
3,721,169	-				-1.9
3,721,169	-				-2.5
3,721,183	+				-0.0
3,721,183	+				-1.3
3,721,244	+		Rru_A3227	0.14	-0.0
3,721,245	-		Rru_A3227	0.14	-2.0
3,721,245	-		Rru_A3227	0.14	-0.0
3,721,331	-		Rru_A3227	0.25	-0.0
3,721,564	+		Rru_A3227	0.56	-0.9
3,721,753	+		Rru_A3227	0.81	-0.0
3,721,763	+		Rru_A3227	0.82	-0.0
3,721,763	+		Rru_A3227	0.82	-2.3
3,721,764	-		Rru_A3227	0.82	-2.7
3,721,765	+		Rru_A3227	0.82	-3.3
3,721,765	+		Rru_A3227	0.82	-0.0
3,721,765	+		Rru_A3227	0.82	-1.6
3,721,765	+		Rru_A3227	0.82	-0.0
3,721,765	+		Rru_A3227	0.82	-1.4
3,721,765	+		Rru_A3227	0.82	-0.0
3,721,766	-		Rru_A3227	0.82	-1.8
3,721,766	-		Rru_A3227	0.82	-2.1
3,721,766	-		Rru_A3227	0.82	-1.3
3,721,766	-		Rru_A3227	0.82	-1.7
3,721,766	-		Rru_A3227	0.82	-0.0
3,721,766	-		Rru_A3227	0.82	-0.0
3,721,766	-		Rru_A3227	0.82	-3.5
3,721,895	+				-0.0
3,721,896	-				-1.6
3,721,896	-				-3.1
3,721,896	-				-0.0
3,721,961	+				-1.4
3,721,961	+				-0.0
3,721,962	-				-0.0
3,721,962	-				-0.0
3,721,982	+				-1.6
3,721,983	-				+0.6
3,721,983	-				-0.0
3,722,040	+				-0.8
3,722,071	+				-1.0
3,722,134	-				-1.3
3,722,181	+				+0.4
3,722,181	+				+0.5
3,722,182	-				-0.8
3,722,185	+				+1.0
3,722,261	-				-1.0
3,722,545	+		Rru_A3228	0.64	-1.0
3,722,546	-		Rru_A3228	0.64	-0.0
3,722,792	+				-0.0
3,722,792	+				+0.9
3,722,792	+				+1.2
3,722,792	+				+1.2
3,722,792	+				+1.6
3,722,793	-				-1.5
3,722,838	+				-0.0
3,722,838	+				+0.8
3,722,838	+				+0.7
3,722,838	+				+1.2
3,722,838	+				-0.0
3,722,838	+				+2.0
3,722,838	+				-0.0
3,722,838	+				-0.0
3,722,838	+				+1.2
3,722,838	+				+1.3
3,722,838	+				-0.0
3,722,838	+				+0.3
3,722,838	+				-0.0
3,722,838	+				+1.2
3,722,839	-				-0.9
3,722,839	-				-0.0
3,722,839	-				-0.0
3,722,839	-				-1.3
3,722,839	-				-0.3
3,722,839	-				-0.2
3,722,839	-				-0.0
3,722,843	+				+1.1
3,722,844	-				-0.0