Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3224

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,717,954	+		Rru_A3223	0.18	-0.0
3,717,955	-		Rru_A3223	0.18	-0.0
3,718,057	+		Rru_A3223	0.30	-0.0
3,718,058	-		Rru_A3223	0.30	-0.0
3,718,058	-		Rru_A3223	0.30	-0.0
3,718,225	+		Rru_A3223	0.51	+1.1
3,718,359	+		Rru_A3223	0.67	+1.3
3,718,365	+		Rru_A3223	0.68	+0.5
3,718,366	-		Rru_A3223	0.68	-0.0
3,718,526	-		Rru_A3223	0.87	-0.1
3,718,526	-		Rru_A3223	0.87	+0.5
3,718,631	-				-0.0
3,718,631	-				-0.0
3,718,631	-				+1.1
3,718,920	+		Rru_A3224	0.42	-0.0
3,718,921	-		Rru_A3224	0.42	+0.3
3,719,017	+		Rru_A3224	0.56	-0.0
3,719,017	+		Rru_A3224	0.56	-0.0
3,719,017	+		Rru_A3224	0.56	-0.0
3,719,018	-		Rru_A3224	0.57	-0.0
3,719,018	-		Rru_A3224	0.57	-0.0
3,719,018	-		Rru_A3224	0.57	-1.0
3,719,080	-		Rru_A3224	0.66	-0.0
3,719,124	+		Rru_A3224	0.73	-1.0
3,719,124	+		Rru_A3224	0.73	+0.3
3,719,124	+		Rru_A3224	0.73	-0.3
3,719,208	+		Rru_A3224	0.85	+0.1
3,719,208	+		Rru_A3224	0.85	-0.0
3,719,209	-		Rru_A3224	0.85	-0.9
3,719,209	-		Rru_A3224	0.85	-0.5
3,719,356	-				-0.5
3,719,395	+				+0.7
3,719,396	-				-0.0
3,719,421	+		Rru_A3225	0.14	-0.4
3,719,587	+		Rru_A3225	0.57	-0.0
3,719,587	+		Rru_A3225	0.57	-0.0
3,719,587	+		Rru_A3225	0.57	+0.7
3,719,588	-		Rru_A3225	0.57	-0.0
3,719,588	-		Rru_A3225	0.57	-0.0
3,719,772	+				-0.0
3,719,773	-				-0.0
3,719,773	-				-0.0
3,719,790	+				+0.4
3,719,792	+				+1.0
3,719,792	+				-1.0
3,719,793	-				-0.0
3,719,793	-				+0.6
3,719,946	+		Rru_AR0059	0.39	-0.5
3,719,972	-		Rru_AR0059	0.74	+0.3
3,719,972	-		Rru_AR0059	0.74	-0.0
3,719,982	+		Rru_AR0059	0.88	-0.0
3,720,004	+				-0.0
3,720,005	-				-0.0
3,720,006	+				-0.0
3,720,006	+				-0.0
3,720,007	-				+0.0
3,720,007	-				-0.0
3,720,100	+				+0.9
3,720,100	+				+0.8
3,720,100	+				-0.0
3,720,100	+				+1.2
3,720,100	+				-0.0
3,720,101	-				-0.0
3,720,101	-				+0.3
3,720,120	+				+0.3
3,720,121	-				-0.0