Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3219

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,712,139	+				+0.5
3,712,140	-				+0.7
3,712,155	-				-0.0
3,712,155	-				-0.0
3,712,155	-				+0.9
3,712,191	-				+0.5
3,712,195	-				-0.0
3,712,195	-				+0.4
3,712,196	+				-0.2
3,712,323	-		Rru_A3218	0.14	+1.3
3,712,354	+		Rru_A3218	0.24	-0.0
3,712,354	+		Rru_A3218	0.24	+0.2
3,712,480	-		Rru_A3218	0.65	-0.0
3,712,588	-				-0.0
3,712,588	-				-0.0
3,712,642	-				+0.7
3,712,698	+				+0.7
3,712,699	-				-1.0
3,712,740	+				+0.5
3,712,740	+				+0.2
3,712,740	+				-1.0
3,712,740	+				-1.6
3,712,750	-				-0.0
3,712,876	+		Rru_A3219	0.11	+0.6
3,712,877	-		Rru_A3219	0.11	+0.8
3,712,965	+		Rru_A3219	0.19	+0.1
3,712,965	+		Rru_A3219	0.19	-0.0
3,712,965	+		Rru_A3219	0.19	-0.0
3,713,160	+		Rru_A3219	0.37	-0.0
3,713,205	+		Rru_A3219	0.41	+0.1
3,713,205	+		Rru_A3219	0.41	-0.0
3,713,205	+		Rru_A3219	0.41	+1.3
3,713,247	+		Rru_A3219	0.45	-0.4
3,713,247	+		Rru_A3219	0.45	+1.8
3,713,247	+		Rru_A3219	0.45	-0.0
3,713,248	-		Rru_A3219	0.45	+0.9
3,713,248	-		Rru_A3219	0.45	-1.6
3,713,248	-		Rru_A3219	0.45	+1.0
3,713,376	+		Rru_A3219	0.57	-0.0
3,713,376	+		Rru_A3219	0.57	-0.0
3,713,377	-		Rru_A3219	0.58	-0.0
3,713,380	-		Rru_A3219	0.58	+0.1
3,713,380	-		Rru_A3219	0.58	+1.1
3,713,622	+		Rru_A3219	0.81	-0.3
3,713,623	-		Rru_A3219	0.81	-0.0
3,713,623	-		Rru_A3219	0.81	+0.2
3,713,623	-		Rru_A3219	0.81	+0.2
3,713,623	-		Rru_A3219	0.81	-1.6
3,713,623	-		Rru_A3219	0.81	-0.4
3,713,623	-		Rru_A3219	0.81	-0.0
3,713,712	+		Rru_A3219	0.89	+0.9
3,713,713	-		Rru_A3219	0.89	-0.0
3,713,772	+				+1.7
3,713,772	+				-1.1
3,713,772	+				-0.0
3,713,773	-				+0.2
3,713,773	-				-1.0
3,713,886	+				+0.4
3,713,886	+				+0.3
3,713,886	+				-0.0
3,713,887	-				-0.0
3,714,012	+				+0.1
3,714,012	+				-0.1
3,714,012	+				+0.1
3,714,013	-				+0.8
3,714,046	-				+0.5
3,714,102	+		Rru_A3220	0.12	-0.0
3,714,112	-		Rru_A3220	0.13	+0.7
3,714,112	-		Rru_A3220	0.13	-1.0
3,714,184	+		Rru_A3220	0.17	-0.5
3,714,185	-		Rru_A3220	0.17	-0.0
3,714,390	+		Rru_A3220	0.27	+0.9
3,714,390	+		Rru_A3220	0.27	-0.1
3,714,390	+		Rru_A3220	0.27	-0.0
3,714,390	+		Rru_A3220	0.27	+0.8
3,714,453	+		Rru_A3220	0.30	-0.0
3,714,484	+		Rru_A3220	0.32	-0.0
3,714,484	+		Rru_A3220	0.32	+0.1
3,714,484	+		Rru_A3220	0.32	-0.6
3,714,484	+		Rru_A3220	0.32	-0.0
3,714,484	+		Rru_A3220	0.32	-0.0
3,714,484	+		Rru_A3220	0.32	-0.0
3,714,485	-		Rru_A3220	0.32	-0.2
3,714,485	-		Rru_A3220	0.32	-0.0
3,714,486	+		Rru_A3220	0.32	-0.0
3,714,486	+		Rru_A3220	0.32	-1.4
3,714,522	+		Rru_A3220	0.34	+0.7
3,714,522	+		Rru_A3220	0.34	+0.4
3,714,601	-		Rru_A3220	0.38	-0.0
3,714,633	+		Rru_A3220	0.39	+0.3
3,714,707	-		Rru_A3220	0.43	-0.0
3,714,711	-		Rru_A3220	0.43	+0.3