Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3216

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,707,127	-				-0.0
3,707,234	-				+0.1
3,707,367	+				-0.0
3,707,367	+				-0.0
3,707,368	-				-0.0
3,707,368	-				-0.0
3,707,374	+				+1.6
3,707,374	+				-0.0
3,707,374	+				-1.0
3,707,375	-				+0.8
3,707,375	-				+0.2
3,707,375	-				-0.4
3,707,376	+				+0.2
3,707,376	+				+0.5
3,707,377	-				-0.0
3,707,454	-				+1.5
3,707,523	+				+0.1
3,707,524	-				-0.0
3,707,524	-				-0.0
3,707,566	-		Rru_A3215	0.12	-0.2
3,707,566	-		Rru_A3215	0.12	+0.1
3,707,566	-		Rru_A3215	0.12	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0
3,708,258	+				-0.0
3,708,258	+				-0.0
3,708,259	-				-0.0
3,708,259	-				-0.4
3,708,259	-				+1.4
3,708,603	-		Rru_A3216	0.15	-0.0
3,708,728	+		Rru_A3216	0.19	-0.2
3,708,977	+		Rru_A3216	0.27	+0.0
3,708,978	-		Rru_A3216	0.27	-0.0
3,708,979	+		Rru_A3216	0.27	-0.0
3,708,979	+		Rru_A3216	0.27	+0.7
3,708,979	+		Rru_A3216	0.27	-0.0
3,708,979	+		Rru_A3216	0.27	-0.0
3,708,979	+		Rru_A3216	0.27	-1.7
3,708,979	+		Rru_A3216	0.27	-0.0
3,708,980	-		Rru_A3216	0.27	-1.0
3,708,980	-		Rru_A3216	0.27	-0.0
3,708,980	-		Rru_A3216	0.27	-1.0
3,708,980	-		Rru_A3216	0.27	+1.1
3,708,980	-		Rru_A3216	0.27	-0.0
3,709,253	+		Rru_A3216	0.35	+0.1
3,709,253	+		Rru_A3216	0.35	+0.1
3,709,253	+		Rru_A3216	0.35	+0.9
3,709,253	+		Rru_A3216	0.35	-0.0
3,709,254	-		Rru_A3216	0.35	-0.0
3,709,254	-		Rru_A3216	0.35	-0.0
3,709,254	-		Rru_A3216	0.35	+1.7
3,709,254	-		Rru_A3216	0.35	+0.4
3,709,410	+		Rru_A3216	0.40	-0.0
3,709,410	+		Rru_A3216	0.40	-0.0
3,709,411	-		Rru_A3216	0.40	-2.3
3,709,411	-		Rru_A3216	0.40	-0.0
3,709,411	-		Rru_A3216	0.40	-0.0
3,709,411	-		Rru_A3216	0.40	-0.0
3,709,480	+		Rru_A3216	0.42	-0.0
3,709,481	-		Rru_A3216	0.42	-0.3
3,709,481	-		Rru_A3216	0.42	-0.0
3,709,524	+		Rru_A3216	0.43	-0.5
3,709,831	+		Rru_A3216	0.52	-0.0
3,709,934	-		Rru_A3216	0.56	-0.0
3,711,056	+		Rru_A3216	0.90	-0.0
3,711,057	-		Rru_A3216	0.90	-1.0
3,711,057	-		Rru_A3216	0.90	+0.3
3,711,057	-		Rru_A3216	0.90	-0.7
3,711,263	+				-0.0
3,711,263	+				-0.0
3,711,264	-				-0.0
3,711,264	-				+0.7
3,711,276	-				-0.0
3,711,362	+				-0.0
3,711,362	+				-0.0
3,711,363	-				-0.0
3,711,363	-				-0.0
3,711,364	+				-0.0
3,711,364	+				-0.0
3,711,364	+				+0.1
3,711,364	+				-0.0
3,711,502	+				-0.0
3,711,510	+				+0.0
3,712,139	+				+0.5
3,712,140	-				+0.7
3,712,155	-				-0.0
3,712,155	-				-0.0
3,712,155	-				+0.9
3,712,191	-				+0.5
3,712,195	-				-0.0
3,712,195	-				+0.4
3,712,196	+				-0.2
3,712,323	-		Rru_A3218	0.14	+1.3
3,712,354	+		Rru_A3218	0.24	-0.0
3,712,354	+		Rru_A3218	0.24	+0.2