Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3214

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,704,767	+		Rru_A3213	0.60	+0.6
3,704,767	+		Rru_A3213	0.60	-0.0
3,704,767	+		Rru_A3213	0.60	-0.0
3,704,767	+		Rru_A3213	0.60	+0.4
3,704,768	-		Rru_A3213	0.60	-1.0
3,704,768	-		Rru_A3213	0.60	-0.6
3,704,768	-		Rru_A3213	0.60	+0.8
3,704,908	+		Rru_A3213	0.66	+0.3
3,704,909	-		Rru_A3213	0.66	-0.0
3,704,909	-		Rru_A3213	0.66	+1.1
3,704,909	-		Rru_A3213	0.66	+0.7
3,704,909	-		Rru_A3213	0.66	+0.9
3,704,909	-		Rru_A3213	0.66	+1.0
3,705,027	+		Rru_A3213	0.71	+0.2
3,705,027	+		Rru_A3213	0.71	+0.6
3,705,028	-		Rru_A3213	0.71	-0.0
3,705,028	-		Rru_A3213	0.71	+0.7
3,705,028	-		Rru_A3213	0.71	+1.7
3,705,028	-		Rru_A3213	0.71	-3.3
3,705,028	-		Rru_A3213	0.71	+1.5
3,705,028	-		Rru_A3213	0.71	+0.3
3,705,121	+		Rru_A3213	0.75	-0.0
3,705,122	-		Rru_A3213	0.75	+0.0
3,705,122	-		Rru_A3213	0.75	-0.0
3,705,122	-		Rru_A3213	0.75	+1.5
3,705,122	-		Rru_A3213	0.75	+0.5
3,705,130	+		Rru_A3213	0.75	+1.0
3,705,130	+		Rru_A3213	0.75	-0.0
3,705,130	+		Rru_A3213	0.75	+0.4
3,705,130	+		Rru_A3213	0.75	-0.3
3,705,131	-		Rru_A3213	0.75	-0.0
3,705,183	+		Rru_A3213	0.78	-0.0
3,705,927	-		Rru_A3214	0.15	-0.0
3,705,927	-		Rru_A3214	0.15	-1.6
3,705,927	-		Rru_A3214	0.15	-2.1
3,705,927	-		Rru_A3214	0.15	-2.2
3,705,927	-		Rru_A3214	0.15	-0.0
3,705,935	+		Rru_A3214	0.15	-0.0
3,705,935	+		Rru_A3214	0.15	-1.6
3,705,936	-		Rru_A3214	0.15	-0.0
3,705,936	-		Rru_A3214	0.15	-2.4
3,706,073	-		Rru_A3214	0.26	-1.2
3,706,217	+		Rru_A3214	0.38	-0.0
3,706,217	+		Rru_A3214	0.38	-2.5
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-1.3
3,706,240	+		Rru_A3214	0.40	-2.2
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-1.7
3,706,240	+		Rru_A3214	0.40	-2.7
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,241	-		Rru_A3214	0.40	-1.8
3,706,241	-		Rru_A3214	0.40	-1.0
3,706,765	+		Rru_A3214	0.82	-3.0
3,706,766	-		Rru_A3214	0.82	-0.0
3,706,766	-		Rru_A3214	0.82	-0.0
3,706,771	+		Rru_A3214	0.83	-3.1
3,706,772	-		Rru_A3214	0.83	-1.9
3,706,822	+		Rru_A3214	0.87	-2.0
3,706,822	+		Rru_A3214	0.87	-2.6
3,706,822	+		Rru_A3214	0.87	-0.0
3,706,823	-		Rru_A3214	0.87	-0.0
3,706,828	+		Rru_A3214	0.87	-0.0
3,706,829	-		Rru_A3214	0.87	+0.9
3,706,829	-		Rru_A3214	0.87	-1.9
3,706,829	-		Rru_A3214	0.87	-0.0
3,706,900	-				-1.0
3,706,904	+				-0.0
3,706,905	-				-0.0
3,706,985	+				-0.8
3,706,986	-				-0.0
3,707,064	+				-0.0
3,707,064	+				-1.7
3,707,064	+				-2.0
3,707,065	-				+0.1
3,707,065	-				+0.1
3,707,065	-				+0.3
3,707,065	-				+0.4
3,707,077	-				-0.0
3,707,077	-				-0.5
3,707,077	-				-0.0
3,707,127	-				-0.0
3,707,234	-				+0.1
3,707,367	+				-0.0
3,707,367	+				-0.0
3,707,368	-				-0.0
3,707,368	-				-0.0
3,707,374	+				+1.6
3,707,374	+				-0.0
3,707,374	+				-1.0
3,707,375	-				+0.8
3,707,375	-				+0.2
3,707,375	-				-0.4
3,707,376	+				+0.2
3,707,376	+				+0.5
3,707,377	-				-0.0
3,707,454	-				+1.5
3,707,523	+				+0.1
3,707,524	-				-0.0
3,707,524	-				-0.0
3,707,566	-		Rru_A3215	0.12	-0.2
3,707,566	-		Rru_A3215	0.12	+0.1
3,707,566	-		Rru_A3215	0.12	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,575	+		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0
3,707,576	-		Rru_A3215	0.14	-0.0