Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3213

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,702,558	-		Rru_A3212	0.26	+0.5
3,702,558	-		Rru_A3212	0.26	-0.5
3,702,701	+		Rru_A3212	0.44	+0.6
3,702,702	-		Rru_A3212	0.44	+0.3
3,702,702	-		Rru_A3212	0.44	-0.9
3,702,837	-		Rru_A3212	0.62	-0.0
3,702,837	-		Rru_A3212	0.62	-0.0
3,702,837	-		Rru_A3212	0.62	-0.0
3,703,139	+				-0.0
3,703,200	+				-0.0
3,703,215	-				+0.6
3,703,243	-				-2.3
3,703,297	+				-0.0
3,703,297	+				-0.0
3,703,298	-				-0.0
3,703,298	-				-0.0
3,703,298	-				-0.0
3,703,298	-				-1.0
3,703,298	-				+0.1
3,703,406	+				-0.1
3,703,409	+				-0.5
3,703,410	-				+0.5
3,703,413	+				+0.6
3,703,447	+				-0.0
3,703,447	+				-0.0
3,703,870	+		Rru_A3213	0.21	-0.0
3,703,870	+		Rru_A3213	0.21	-0.0
3,703,870	+		Rru_A3213	0.21	-0.0
3,703,871	-		Rru_A3213	0.21	-0.0
3,703,963	+		Rru_A3213	0.25	+0.6
3,703,963	+		Rru_A3213	0.25	-0.0
3,703,964	-		Rru_A3213	0.25	+0.5
3,703,964	-		Rru_A3213	0.25	+0.6
3,704,401	+		Rru_A3213	0.44	-1.0
3,704,402	-		Rru_A3213	0.44	-0.0
3,704,668	+		Rru_A3213	0.56	-1.3
3,704,669	-		Rru_A3213	0.56	+0.4
3,704,669	-		Rru_A3213	0.56	+0.6
3,704,767	+		Rru_A3213	0.60	+0.6
3,704,767	+		Rru_A3213	0.60	-0.0
3,704,767	+		Rru_A3213	0.60	-0.0
3,704,767	+		Rru_A3213	0.60	+0.4
3,704,768	-		Rru_A3213	0.60	-1.0
3,704,768	-		Rru_A3213	0.60	-0.6
3,704,768	-		Rru_A3213	0.60	+0.8
3,704,908	+		Rru_A3213	0.66	+0.3
3,704,909	-		Rru_A3213	0.66	-0.0
3,704,909	-		Rru_A3213	0.66	+1.1
3,704,909	-		Rru_A3213	0.66	+0.7
3,704,909	-		Rru_A3213	0.66	+0.9
3,704,909	-		Rru_A3213	0.66	+1.0
3,705,027	+		Rru_A3213	0.71	+0.2
3,705,027	+		Rru_A3213	0.71	+0.6
3,705,028	-		Rru_A3213	0.71	-0.0
3,705,028	-		Rru_A3213	0.71	+0.7
3,705,028	-		Rru_A3213	0.71	+1.7
3,705,028	-		Rru_A3213	0.71	-3.3
3,705,028	-		Rru_A3213	0.71	+1.5
3,705,028	-		Rru_A3213	0.71	+0.3
3,705,121	+		Rru_A3213	0.75	-0.0
3,705,122	-		Rru_A3213	0.75	+0.0
3,705,122	-		Rru_A3213	0.75	-0.0
3,705,122	-		Rru_A3213	0.75	+1.5
3,705,122	-		Rru_A3213	0.75	+0.5
3,705,130	+		Rru_A3213	0.75	+1.0
3,705,130	+		Rru_A3213	0.75	-0.0
3,705,130	+		Rru_A3213	0.75	+0.4
3,705,130	+		Rru_A3213	0.75	-0.3
3,705,131	-		Rru_A3213	0.75	-0.0
3,705,183	+		Rru_A3213	0.78	-0.0
3,705,927	-		Rru_A3214	0.15	-0.0
3,705,927	-		Rru_A3214	0.15	-1.6
3,705,927	-		Rru_A3214	0.15	-2.1
3,705,927	-		Rru_A3214	0.15	-2.2
3,705,927	-		Rru_A3214	0.15	-0.0
3,705,935	+		Rru_A3214	0.15	-0.0
3,705,935	+		Rru_A3214	0.15	-1.6
3,705,936	-		Rru_A3214	0.15	-0.0
3,705,936	-		Rru_A3214	0.15	-2.4
3,706,073	-		Rru_A3214	0.26	-1.2
3,706,217	+		Rru_A3214	0.38	-0.0
3,706,217	+		Rru_A3214	0.38	-2.5
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-1.3
3,706,240	+		Rru_A3214	0.40	-2.2
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-1.7
3,706,240	+		Rru_A3214	0.40	-2.7
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,240	+		Rru_A3214	0.40	-0.0
3,706,241	-		Rru_A3214	0.40	-1.8
3,706,241	-		Rru_A3214	0.40	-1.0