Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3203

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,691,860	+		Rru_A3202	0.82	-0.0
3,691,860	+		Rru_A3202	0.82	-0.0
3,691,860	+		Rru_A3202	0.82	-0.0
3,691,860	+		Rru_A3202	0.82	-0.0
3,691,862	+		Rru_A3202	0.82	-1.0
3,691,881	+		Rru_A3202	0.83	-0.0
3,691,881	+		Rru_A3202	0.83	-0.0
3,691,881	+		Rru_A3202	0.83	-0.0
3,691,881	+		Rru_A3202	0.83	-0.0
3,691,882	-		Rru_A3202	0.83	-0.0
3,691,882	-		Rru_A3202	0.83	-0.0
3,691,883	+		Rru_A3202	0.83	-0.0
3,691,883	+		Rru_A3202	0.83	-1.0
3,692,052	+		Rru_A3202	0.89	-1.1
3,692,052	+		Rru_A3202	0.89	-2.1
3,692,052	+		Rru_A3202	0.89	-1.4
3,692,052	+		Rru_A3202	0.89	-1.8
3,692,052	+		Rru_A3202	0.89	-1.6
3,692,109	+				-1.0
3,692,109	+				-1.9
3,692,109	+				-1.0
3,692,109	+				-0.0
3,692,109	+				-2.6
3,692,110	-				-0.0
3,692,110	-				-1.6
3,692,110	-				-0.0
3,692,110	-				-0.0
3,692,110	-				-0.0
3,692,110	-				-1.0
3,692,110	-				-1.0
3,692,508	+				-0.9
3,692,674	-		Rru_A3203	0.11	-0.0
3,693,064	+		Rru_A3203	0.27	-1.6
3,693,065	-		Rru_A3203	0.27	+0.5
3,693,065	-		Rru_A3203	0.27	-0.0
3,693,065	-		Rru_A3203	0.27	+0.4
3,693,448	+		Rru_A3203	0.42	-0.0
3,693,449	-		Rru_A3203	0.42	-0.0
3,693,449	-		Rru_A3203	0.42	-0.4
3,693,449	-		Rru_A3203	0.42	-0.5
3,693,506	-		Rru_A3203	0.44	+0.1
3,693,506	-		Rru_A3203	0.44	+0.8
3,693,682	+		Rru_A3203	0.51	-0.0
3,693,682	+		Rru_A3203	0.51	-0.0
3,693,682	+		Rru_A3203	0.51	-0.0
3,693,682	+		Rru_A3203	0.51	-0.0
3,693,683	-		Rru_A3203	0.51	-0.0
3,693,683	-		Rru_A3203	0.51	-0.0
3,693,683	-		Rru_A3203	0.51	-0.9
3,693,683	-		Rru_A3203	0.51	-0.8
3,693,683	-		Rru_A3203	0.51	-1.1
3,693,683	-		Rru_A3203	0.51	-0.0
3,693,683	-		Rru_A3203	0.51	-1.0
3,693,684	+		Rru_A3203	0.51	-0.0
3,693,979	+		Rru_A3203	0.63	-1.0
3,693,979	+		Rru_A3203	0.63	-1.8
3,693,979	+		Rru_A3203	0.63	-1.6
3,693,980	-		Rru_A3203	0.63	-1.0
3,694,059	+		Rru_A3203	0.66	-0.7
3,694,060	-		Rru_A3203	0.66	-0.0
3,694,060	-		Rru_A3203	0.66	-0.0
3,694,131	+		Rru_A3203	0.69	-1.3
3,694,131	+		Rru_A3203	0.69	-0.0
3,694,132	-		Rru_A3203	0.69	+0.3
3,694,132	-		Rru_A3203	0.69	-0.0
3,694,132	-		Rru_A3203	0.69	-1.2
3,694,132	-		Rru_A3203	0.69	-1.9
3,694,132	-		Rru_A3203	0.69	-0.0
3,694,132	-		Rru_A3203	0.69	-1.0
3,694,174	+		Rru_A3203	0.71	-1.2
3,694,174	+		Rru_A3203	0.71	+1.0
3,694,250	-		Rru_A3203	0.74	-0.0
3,694,353	+		Rru_A3203	0.78	-0.6
3,694,353	+		Rru_A3203	0.78	-1.6
3,694,353	+		Rru_A3203	0.78	-1.1
3,694,353	+		Rru_A3203	0.78	-0.0
3,694,354	-		Rru_A3203	0.78	+0.2
3,694,354	-		Rru_A3203	0.78	-0.0
3,694,354	-		Rru_A3203	0.78	-0.3
3,694,410	+		Rru_A3203	0.80	-0.7
3,694,410	+		Rru_A3203	0.80	-1.7
3,694,410	+		Rru_A3203	0.80	-0.0
3,694,411	-		Rru_A3203	0.80	-0.3
3,694,411	-		Rru_A3203	0.80	-0.1
3,694,411	-		Rru_A3203	0.80	-0.0
3,694,411	-		Rru_A3203	0.80	-0.0
3,694,411	-		Rru_A3203	0.80	+0.6
3,694,411	-		Rru_A3203	0.80	+1.0
3,694,549	+		Rru_A3203	0.86	-0.3
3,694,549	+		Rru_A3203	0.86	-1.6
3,694,549	+		Rru_A3203	0.86	+0.3
3,694,549	+		Rru_A3203	0.86	+0.9
3,694,550	-		Rru_A3203	0.86	-0.1
3,694,550	-		Rru_A3203	0.86	-1.0
3,694,550	-		Rru_A3203	0.86	-0.6
3,694,550	-		Rru_A3203	0.86	-0.0
3,694,550	-		Rru_A3203	0.86	-0.0
3,694,552	+		Rru_A3203	0.86	-0.8
3,694,552	+		Rru_A3203	0.86	-0.0
3,694,552	+		Rru_A3203	0.86	-1.6
3,694,552	+		Rru_A3203	0.86	-1.7
3,694,552	+		Rru_A3203	0.86	-0.4
3,694,552	+		Rru_A3203	0.86	-0.0
3,694,552	+		Rru_A3203	0.86	-0.0
3,694,552	+		Rru_A3203	0.86	-0.0
3,694,552	+		Rru_A3203	0.86	-0.0
3,694,553	-		Rru_A3203	0.86	-0.8
3,694,553	-		Rru_A3203	0.86	-0.9
3,694,553	-		Rru_A3203	0.86	-0.0
3,694,553	-		Rru_A3203	0.86	-1.6
3,694,553	-		Rru_A3203	0.86	-1.6
3,694,553	-		Rru_A3203	0.86	-0.9
3,694,553	-		Rru_A3203	0.86	-0.0
3,694,553	-		Rru_A3203	0.86	-0.0
3,694,553	-		Rru_A3203	0.86	-1.0
3,694,553	-		Rru_A3203	0.86	-0.0
3,694,553	-		Rru_A3203	0.86	-1.0
3,694,553	-		Rru_A3203	0.86	-0.6
3,694,916	-				-0.0
3,695,032	-				+0.1
3,695,064	+				+0.5
3,695,064	+				+0.5
3,695,065	-				+0.9
3,695,107	+				+0.4
3,695,107	+				+1.0
3,695,108	-				+0.5
3,695,279	+		Rru_A3204	0.14	+1.1
3,695,279	+		Rru_A3204	0.14	-0.0
3,695,280	-		Rru_A3204	0.15	-0.0
3,695,280	-		Rru_A3204	0.15	+1.0
3,695,286	-		Rru_A3204	0.15	-0.0
3,695,306	+		Rru_A3204	0.16	+0.7
3,695,306	+		Rru_A3204	0.16	+0.5
3,695,307	-		Rru_A3204	0.16	+1.2
3,695,307	-		Rru_A3204	0.16	+2.7
3,695,309	-		Rru_A3204	0.16	+1.2
3,695,309	-		Rru_A3204	0.16	+1.4
3,695,309	-		Rru_A3204	0.16	-0.0
3,695,555	+		Rru_A3204	0.31	-0.6
3,695,555	+		Rru_A3204	0.31	+0.6
3,695,555	+		Rru_A3204	0.31	+0.5
3,695,555	+		Rru_A3204	0.31	-0.0
3,695,556	-		Rru_A3204	0.31	+1.0
3,695,556	-		Rru_A3204	0.31	+0.6
3,695,556	-		Rru_A3204	0.31	+0.5
3,695,556	-		Rru_A3204	0.31	-0.0
3,695,675	+		Rru_A3204	0.38	+1.6
3,695,675	+		Rru_A3204	0.38	-0.0
3,695,675	+		Rru_A3204	0.38	+0.6
3,695,676	-		Rru_A3204	0.38	+0.9
3,695,676	-		Rru_A3204	0.38	+1.5
3,695,676	-		Rru_A3204	0.38	-0.0
3,695,676	-		Rru_A3204	0.38	+1.0
3,695,676	-		Rru_A3204	0.38	+0.8
3,695,676	-		Rru_A3204	0.38	+0.6
3,695,676	-		Rru_A3204	0.38	+0.9
3,695,676	-		Rru_A3204	0.38	+0.5
3,695,676	-		Rru_A3204	0.38	+0.9