Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3200

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,685,734	+		Rru_A3199	0.12	+0.9
3,685,734	+		Rru_A3199	0.12	-0.6
3,685,734	+		Rru_A3199	0.12	-1.0
3,685,736	+		Rru_A3199	0.12	-0.5
3,685,736	+		Rru_A3199	0.12	+1.3
3,685,736	+		Rru_A3199	0.12	-0.1
3,685,736	+		Rru_A3199	0.12	-0.0
3,685,736	+		Rru_A3199	0.12	-0.0
3,685,737	-		Rru_A3199	0.12	+1.0
3,686,043	+		Rru_A3199	0.42	-1.0
3,686,043	+		Rru_A3199	0.42	+0.2
3,686,044	-		Rru_A3199	0.42	+1.4
3,686,136	+		Rru_A3199	0.51	-0.0
3,686,136	+		Rru_A3199	0.51	-0.3
3,686,200	-		Rru_A3199	0.57	+0.2
3,686,200	-		Rru_A3199	0.57	-0.0
3,686,200	-		Rru_A3199	0.57	-0.0
3,686,202	+		Rru_A3199	0.58	+0.6
3,686,202	+		Rru_A3199	0.58	-0.2
3,686,202	+		Rru_A3199	0.58	+0.7
3,686,202	+		Rru_A3199	0.58	+1.6
3,686,202	+		Rru_A3199	0.58	-0.0
3,686,487	+		Rru_A3199	0.86	+0.6
3,686,488	-		Rru_A3199	0.86	+0.4
3,686,488	-		Rru_A3199	0.86	+0.3
3,686,488	-		Rru_A3199	0.86	-0.0
3,686,488	-		Rru_A3199	0.86	+0.2
3,686,656	+				-0.0
3,686,730	+				+1.1
3,686,730	+				+1.0
3,686,730	+				-0.0
3,686,731	-				-0.0
3,686,731	-				+0.3
3,686,731	-				-0.7
3,686,861	+		Rru_A3200	0.12	+1.0
3,686,862	-		Rru_A3200	0.12	-0.0
3,686,862	-		Rru_A3200	0.12	-0.0
3,687,381	+		Rru_A3200	0.42	-0.0
3,687,381	+		Rru_A3200	0.42	+0.9
3,687,381	+		Rru_A3200	0.42	+0.9
3,687,381	+		Rru_A3200	0.42	+0.1
3,687,381	+		Rru_A3200	0.42	-0.0
3,687,382	-		Rru_A3200	0.42	-0.0
3,687,802	-		Rru_A3200	0.67	-0.0
3,687,846	+		Rru_A3200	0.69	-0.0
3,687,846	+		Rru_A3200	0.69	+0.3
3,687,846	+		Rru_A3200	0.69	-0.0
3,687,847	-		Rru_A3200	0.69	+0.9
3,687,847	-		Rru_A3200	0.69	-0.0
3,687,865	-		Rru_A3200	0.70	-0.0
3,687,865	-		Rru_A3200	0.70	+0.6
3,687,865	-		Rru_A3200	0.70	-0.0
3,687,865	-		Rru_A3200	0.70	+1.0
3,687,908	-		Rru_A3200	0.73	+0.8
3,687,946	-		Rru_A3200	0.75	-0.0
3,687,946	-		Rru_A3200	0.75	-0.6
3,687,946	-		Rru_A3200	0.75	+1.0
3,687,946	-		Rru_A3200	0.75	+0.5
3,687,975	+		Rru_A3200	0.77	+0.3
3,687,976	-		Rru_A3200	0.77	-0.0
3,687,976	-		Rru_A3200	0.77	-0.3
3,688,371	+				+0.4
3,688,371	+				-1.2
3,688,372	-				-0.0
3,688,372	-				-1.0
3,688,372	-				-0.0
3,688,386	+				-0.0
3,688,622	+		Rru_A3201	0.24	+0.8
3,688,623	-		Rru_A3201	0.24	+0.4
3,688,623	-		Rru_A3201	0.24	+0.1
3,688,623	-		Rru_A3201	0.24	-0.0
3,688,640	-		Rru_A3201	0.26	+0.2
3,688,640	-		Rru_A3201	0.26	+1.2
3,688,664	+		Rru_A3201	0.28	-1.0
3,688,664	+		Rru_A3201	0.28	+0.5
3,688,665	-		Rru_A3201	0.28	-0.0
3,688,665	-		Rru_A3201	0.28	-0.0
3,688,937	+		Rru_A3201	0.53	+1.4
3,688,937	+		Rru_A3201	0.53	-0.0
3,688,937	+		Rru_A3201	0.53	-0.0
3,688,937	+		Rru_A3201	0.53	+0.6
3,688,938	-		Rru_A3201	0.53	-0.0
3,688,938	-		Rru_A3201	0.53	-1.0
3,688,938	-		Rru_A3201	0.53	-0.0
3,688,938	-		Rru_A3201	0.53	-0.0
3,689,037	-		Rru_A3201	0.63	+1.3
3,689,057	-		Rru_A3201	0.64	-0.0
3,689,264	-		Rru_A3201	0.84	-0.0
3,689,264	-		Rru_A3201	0.84	-0.0