Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3171

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,663,107	+		Rru_A3169	0.88	-1.0
3,663,108	-		Rru_A3169	0.88	-0.0
3,663,108	-		Rru_A3169	0.88	-2.8
3,663,108	-		Rru_A3169	0.88	-0.0
3,663,233	+				-0.2
3,663,233	+				-0.0
3,663,233	+				-0.1
3,663,234	-				+0.6
3,663,234	-				+0.4
3,663,235	+				+0.1
3,663,235	+				+0.1
3,663,236	-				-0.0
3,663,236	-				-0.0
3,663,236	-				-0.0
3,663,300	-				+0.6
3,663,313	+				+1.2
3,663,314	-				-0.0
3,663,314	-				+1.0
3,663,326	+				+0.2
3,663,326	+				+0.9
3,663,327	-				-1.6
3,663,327	-				+0.1
3,663,327	-				-0.0
3,663,327	-				-0.0
3,663,352	+				+0.1
3,663,352	+				-0.2
3,663,352	+				-0.0
3,663,353	-				-0.0
3,663,439	+		Rru_A3170	0.16	+0.6
3,663,439	+		Rru_A3170	0.16	-0.0
3,663,439	+		Rru_A3170	0.16	-0.0
3,663,440	-		Rru_A3170	0.16	+0.2
3,663,440	-		Rru_A3170	0.16	-0.0
3,663,442	-		Rru_A3170	0.17	+0.7
3,663,442	-		Rru_A3170	0.17	+0.7
3,663,565	+		Rru_A3170	0.61	-0.1
3,663,565	+		Rru_A3170	0.61	-0.0
3,663,718	+				+0.7
3,663,751	+				+2.0
3,663,777	+				+0.9
3,663,915	+		Rru_A3171	0.41	-0.1
3,663,915	+		Rru_A3171	0.41	-0.0
3,663,915	+		Rru_A3171	0.41	-0.0
3,663,916	-		Rru_A3171	0.42	+0.5
3,663,916	-		Rru_A3171	0.42	+0.8
3,663,916	-		Rru_A3171	0.42	+0.3
3,663,916	-		Rru_A3171	0.42	-0.0
3,663,936	+		Rru_A3171	0.48	-0.2
3,663,937	-		Rru_A3171	0.48	+0.3
3,663,937	-		Rru_A3171	0.48	+0.1
3,663,937	-		Rru_A3171	0.48	+0.3
3,663,946	+		Rru_A3171	0.51	-0.3
3,663,946	+		Rru_A3171	0.51	-0.0
3,663,946	+		Rru_A3171	0.51	+1.8
3,663,947	-		Rru_A3171	0.51	-1.0
3,663,947	-		Rru_A3171	0.51	-0.0
3,663,947	-		Rru_A3171	0.51	-0.5
3,664,093	-				+0.8
3,664,330	+		Rru_A3172	0.23	+0.8
3,664,569	+		Rru_A3172	0.61	+3.0
3,664,654	+		Rru_A3172	0.74	+0.2
3,664,654	+		Rru_A3172	0.74	+1.3
3,664,949	+		Rru_A3173	0.21	-0.0
3,664,949	+		Rru_A3173	0.21	-1.0
3,664,950	-		Rru_A3173	0.21	-0.0
3,665,051	+		Rru_A3173	0.37	+1.4
3,665,052	-		Rru_A3173	0.37	-1.0