Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3169

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,660,762	+		Rru_A3168	0.15	-0.0
3,660,762	+		Rru_A3168	0.15	-0.4
3,660,762	+		Rru_A3168	0.15	-0.0
3,660,763	-		Rru_A3168	0.15	-0.0
3,660,763	-		Rru_A3168	0.15	-1.6
3,660,763	-		Rru_A3168	0.15	-0.0
3,660,798	+		Rru_A3168	0.19	-0.0
3,660,856	-		Rru_A3168	0.24	-0.0
3,660,856	-		Rru_A3168	0.24	-0.0
3,660,915	+		Rru_A3168	0.30	-0.0
3,660,916	-		Rru_A3168	0.30	-1.6
3,661,023	+		Rru_A3168	0.40	-1.0
3,661,024	-		Rru_A3168	0.40	-0.0
3,661,024	-		Rru_A3168	0.40	-0.0
3,661,110	+		Rru_A3168	0.49	-1.0
3,661,312	-		Rru_A3168	0.68	-0.0
3,662,429	+		Rru_A3169	0.47	-0.0
3,662,677	-		Rru_A3169	0.62	-0.0
3,662,677	-		Rru_A3169	0.62	-0.0
3,663,107	+		Rru_A3169	0.88	-1.0
3,663,108	-		Rru_A3169	0.88	-0.0
3,663,108	-		Rru_A3169	0.88	-2.8
3,663,108	-		Rru_A3169	0.88	-0.0
3,663,233	+				-0.2
3,663,233	+				-0.0
3,663,233	+				-0.1
3,663,234	-				+0.6
3,663,234	-				+0.4
3,663,235	+				+0.1
3,663,235	+				+0.1
3,663,236	-				-0.0
3,663,236	-				-0.0
3,663,236	-				-0.0
3,663,300	-				+0.6
3,663,313	+				+1.2
3,663,314	-				-0.0
3,663,314	-				+1.0
3,663,326	+				+0.2
3,663,326	+				+0.9
3,663,327	-				-1.6
3,663,327	-				+0.1
3,663,327	-				-0.0
3,663,327	-				-0.0
3,663,352	+				+0.1
3,663,352	+				-0.2
3,663,352	+				-0.0
3,663,353	-				-0.0
3,663,439	+		Rru_A3170	0.16	+0.6
3,663,439	+		Rru_A3170	0.16	-0.0
3,663,439	+		Rru_A3170	0.16	-0.0
3,663,440	-		Rru_A3170	0.16	+0.2
3,663,440	-		Rru_A3170	0.16	-0.0
3,663,442	-		Rru_A3170	0.17	+0.7
3,663,442	-		Rru_A3170	0.17	+0.7
3,663,565	+		Rru_A3170	0.61	-0.1
3,663,565	+		Rru_A3170	0.61	-0.0
3,663,718	+				+0.7
3,663,751	+				+2.0
3,663,777	+				+0.9
3,663,915	+		Rru_A3171	0.41	-0.1
3,663,915	+		Rru_A3171	0.41	-0.0
3,663,915	+		Rru_A3171	0.41	-0.0
3,663,916	-		Rru_A3171	0.42	+0.5
3,663,916	-		Rru_A3171	0.42	+0.8
3,663,916	-		Rru_A3171	0.42	+0.3
3,663,916	-		Rru_A3171	0.42	-0.0
3,663,936	+		Rru_A3171	0.48	-0.2
3,663,937	-		Rru_A3171	0.48	+0.3
3,663,937	-		Rru_A3171	0.48	+0.1
3,663,937	-		Rru_A3171	0.48	+0.3
3,663,946	+		Rru_A3171	0.51	-0.3
3,663,946	+		Rru_A3171	0.51	-0.0
3,663,946	+		Rru_A3171	0.51	+1.8
3,663,947	-		Rru_A3171	0.51	-1.0
3,663,947	-		Rru_A3171	0.51	-0.0
3,663,947	-		Rru_A3171	0.51	-0.5
3,664,093	-				+0.8