Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3162

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,652,903	+				-0.0
3,653,063	-		Rru_A3161	0.15	-1.6
3,653,091	+		Rru_A3161	0.19	+1.1
3,653,091	+		Rru_A3161	0.19	-0.0
3,653,092	-		Rru_A3161	0.19	+0.2
3,653,092	-		Rru_A3161	0.19	+0.6
3,653,092	-		Rru_A3161	0.19	-0.0
3,653,092	-		Rru_A3161	0.19	-0.0
3,653,092	-		Rru_A3161	0.19	-0.0
3,653,107	+		Rru_A3161	0.20	+0.6
3,653,108	-		Rru_A3161	0.21	-0.0
3,653,154	+		Rru_A3161	0.26	-0.0
3,653,193	+		Rru_A3161	0.30	+0.4
3,653,193	+		Rru_A3161	0.30	-1.0
3,653,193	+		Rru_A3161	0.30	+0.9
3,653,193	+		Rru_A3161	0.30	+1.1
3,653,193	+		Rru_A3161	0.30	+0.2
3,653,194	-		Rru_A3161	0.31	+1.5
3,653,194	-		Rru_A3161	0.31	-0.1
3,653,194	-		Rru_A3161	0.31	-1.0
3,653,194	-		Rru_A3161	0.31	-0.0
3,653,825	+				-0.0
3,653,936	+		Rru_A3162	0.17	-0.0
3,653,936	+		Rru_A3162	0.17	-3.7
3,653,937	-		Rru_A3162	0.17	-5.2
3,653,937	-		Rru_A3162	0.17	-1.0
3,653,972	+		Rru_A3162	0.21	-0.0
3,653,973	-		Rru_A3162	0.21	-2.2
3,653,991	+		Rru_A3162	0.23	-2.3
3,653,991	+		Rru_A3162	0.23	-1.6
3,653,991	+		Rru_A3162	0.23	-1.0
3,653,991	+		Rru_A3162	0.23	-0.0
3,653,991	+		Rru_A3162	0.23	-3.8
3,653,991	+		Rru_A3162	0.23	-0.0
3,653,991	+		Rru_A3162	0.23	-3.4
3,653,992	-		Rru_A3162	0.24	-0.0
3,653,992	-		Rru_A3162	0.24	-0.0
3,653,992	-		Rru_A3162	0.24	-3.5
3,653,992	-		Rru_A3162	0.24	-0.0
3,653,992	-		Rru_A3162	0.24	-0.0
3,653,992	-		Rru_A3162	0.24	-1.9
3,653,992	-		Rru_A3162	0.24	-3.3
3,654,029	+		Rru_A3162	0.28	-2.9
3,654,029	+		Rru_A3162	0.28	-1.8
3,654,029	+		Rru_A3162	0.28	-0.0
3,654,029	+		Rru_A3162	0.28	-1.6
3,654,029	+		Rru_A3162	0.28	-0.0
3,654,030	-		Rru_A3162	0.28	-2.0
3,654,030	-		Rru_A3162	0.28	-2.1
3,654,030	-		Rru_A3162	0.28	-3.0
3,654,030	-		Rru_A3162	0.28	-1.0
3,654,175	+		Rru_A3162	0.45	-0.4
3,654,182	+		Rru_A3162	0.45	-0.5
3,654,182	+		Rru_A3162	0.45	-0.0
3,654,182	+		Rru_A3162	0.45	-0.0
3,654,182	+		Rru_A3162	0.45	-1.0
3,654,410	+		Rru_A3162	0.72	-0.0
3,654,423	+		Rru_A3162	0.73	-2.5
3,654,423	+		Rru_A3162	0.73	+0.4
3,654,504	-		Rru_A3162	0.83	-3.1
3,654,504	-		Rru_A3162	0.83	-2.6
3,654,504	-		Rru_A3162	0.83	-2.0
3,654,504	-		Rru_A3162	0.83	-1.6
3,654,504	-		Rru_A3162	0.83	-0.0
3,654,504	-		Rru_A3162	0.83	-0.8
3,654,504	-		Rru_A3162	0.83	-3.6
3,654,514	-		Rru_A3162	0.84	-2.4
3,654,514	-		Rru_A3162	0.84	-2.1
3,654,580	+				-0.0
3,654,581	-				-1.3
3,655,554	+				+1.5