Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3139

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,620,316	+		Rru_A3138	0.40	-0.8
3,620,316	+		Rru_A3138	0.40	-0.0
3,620,317	-		Rru_A3138	0.40	+1.3
3,620,317	-		Rru_A3138	0.40	+0.1
3,620,319	+		Rru_A3138	0.40	+1.1
3,620,319	+		Rru_A3138	0.40	-0.0
3,620,320	-		Rru_A3138	0.40	+0.9
3,620,445	+		Rru_A3138	0.50	+1.1
3,620,445	+		Rru_A3138	0.50	-0.0
3,620,445	+		Rru_A3138	0.50	-0.0
3,620,446	-		Rru_A3138	0.50	-0.0
3,620,523	+		Rru_A3138	0.57	-0.0
3,620,523	+		Rru_A3138	0.57	+0.2
3,620,524	-		Rru_A3138	0.57	-0.0
3,621,256	-				-0.0
3,621,256	-				-0.0
3,621,256	-				+1.3
3,621,304	+				-0.0
3,621,305	-				+0.9
3,621,305	-				-0.0
3,621,305	-				+0.3
3,621,413	+		Rru_A3139	0.19	-1.0
3,621,481	+		Rru_A3139	0.27	-2.0
3,621,481	+		Rru_A3139	0.27	-0.0
3,621,481	+		Rru_A3139	0.27	-2.0
3,621,572	-		Rru_A3139	0.37	-2.0
3,621,572	-		Rru_A3139	0.37	-0.0
3,621,576	+		Rru_A3139	0.38	-0.0
3,621,577	-		Rru_A3139	0.38	-3.8
3,621,577	-		Rru_A3139	0.38	-0.8
3,621,577	-		Rru_A3139	0.38	-2.1
3,621,577	-		Rru_A3139	0.38	-1.0
3,621,577	-		Rru_A3139	0.38	-2.0
3,622,011	-		Rru_A3139	0.89	-0.0
3,622,022	+		Rru_A3139	0.90	-1.6
3,622,023	-				-2.3
3,622,090	+				+0.0
3,622,469	+				-0.0
3,622,914	+		Rru_A3140	0.34	-0.0
3,622,914	+		Rru_A3140	0.34	+1.2
3,622,914	+		Rru_A3140	0.34	+0.3
3,622,915	-		Rru_A3140	0.34	-0.0
3,622,915	-		Rru_A3140	0.34	-0.7
3,622,971	+		Rru_A3140	0.38	-0.0
3,622,971	+		Rru_A3140	0.38	-0.8
3,622,971	+		Rru_A3140	0.38	+1.2
3,622,971	+		Rru_A3140	0.38	-0.5
3,622,971	+		Rru_A3140	0.38	+0.7
3,622,971	+		Rru_A3140	0.38	+0.7
3,622,972	-		Rru_A3140	0.38	-0.0
3,622,972	-		Rru_A3140	0.38	-0.0
3,622,972	-		Rru_A3140	0.38	-0.0
3,622,972	-		Rru_A3140	0.38	-1.0
3,622,972	-		Rru_A3140	0.38	-0.0
3,622,972	-		Rru_A3140	0.38	-0.0
3,622,972	-		Rru_A3140	0.38	-0.0
3,623,099	+		Rru_A3140	0.47	-0.0