Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3134

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,612,377	+		Rru_A3132	0.54	+0.4
3,612,377	+		Rru_A3132	0.54	+0.8
3,612,377	+		Rru_A3132	0.54	-0.0
3,612,378	-		Rru_A3132	0.54	-0.3
3,612,378	-		Rru_A3132	0.54	-0.3
3,612,378	-		Rru_A3132	0.54	-0.0
3,612,378	-		Rru_A3132	0.54	+0.1
3,612,378	-		Rru_A3132	0.54	-1.2
3,612,378	-		Rru_A3132	0.54	-0.0
3,612,638	+		Rru_A3132	0.71	-0.0
3,612,638	+		Rru_A3132	0.71	+0.5
3,612,638	+		Rru_A3132	0.71	+1.2
3,612,638	+		Rru_A3132	0.71	+0.4
3,612,638	+		Rru_A3132	0.71	+1.6
3,612,638	+		Rru_A3132	0.71	-0.0
3,612,638	+		Rru_A3132	0.71	-1.0
3,612,638	+		Rru_A3132	0.71	-0.2
3,612,639	-		Rru_A3132	0.71	-0.1
3,612,639	-		Rru_A3132	0.71	-0.1
3,612,639	-		Rru_A3132	0.71	-1.0
3,612,639	-		Rru_A3132	0.71	+0.8
3,612,639	-		Rru_A3132	0.71	-1.2
3,612,639	-		Rru_A3132	0.71	-0.0
3,612,789	+		Rru_A3132	0.82	-0.0
3,613,065	+				-0.0
3,613,065	+				-0.4
3,613,065	+				+0.5
3,613,065	+				-0.0
3,613,066	-				+0.9
3,613,066	-				+0.2
3,613,066	-				+1.2
3,613,066	-				+0.2
3,613,066	-				-1.6
3,613,173	+		Rru_A3133	0.24	-0.7
3,613,451	+				-0.0
3,613,452	-				+0.7
3,613,452	-				+0.4
3,613,452	-				+0.6
3,613,452	-				+0.7
3,613,643	-		Rru_A3134	0.19	+0.7
3,613,708	+		Rru_A3134	0.23	-0.0
3,613,709	-		Rru_A3134	0.23	+0.1
3,613,709	-		Rru_A3134	0.23	+0.7
3,613,875	-		Rru_A3134	0.33	-0.0
3,613,875	-		Rru_A3134	0.33	+1.1
3,613,876	+		Rru_A3134	0.34	+0.3
3,614,075	+		Rru_A3134	0.46	+0.3
3,614,075	+		Rru_A3134	0.46	-0.6
3,614,075	+		Rru_A3134	0.46	+0.0
3,614,075	+		Rru_A3134	0.46	-0.2
3,614,076	-		Rru_A3134	0.46	-0.0
3,614,291	+		Rru_A3134	0.59	+0.8
3,614,291	+		Rru_A3134	0.59	+1.2
3,614,291	+		Rru_A3134	0.59	-0.0
3,614,291	+		Rru_A3134	0.59	-0.4
3,614,292	-		Rru_A3134	0.59	-0.1
3,614,292	-		Rru_A3134	0.59	+0.8
3,614,474	+		Rru_A3134	0.71	+0.6
3,614,474	+		Rru_A3134	0.71	+0.7
3,614,475	-		Rru_A3134	0.71	+1.4
3,614,475	-		Rru_A3134	0.71	-0.0
3,614,834	+				-0.0
3,614,834	+				-0.0
3,614,835	-				+1.3
3,615,052	+				+0.3
3,615,053	-				+0.5
3,615,053	-				-0.0
3,615,059	-				-1.0
3,615,059	-				+0.5
3,615,171	+		Rru_A3135	0.18	-0.0
3,615,172	-		Rru_A3135	0.19	-1.0
3,615,297	+		Rru_A3135	0.29	+0.5
3,615,680	-		Rru_A3135	0.60	+0.5
3,615,818	+		Rru_A3135	0.72	-1.0
3,615,819	-		Rru_A3135	0.72	-0.0
3,615,819	-		Rru_A3135	0.72	-0.0
3,615,820	+		Rru_A3135	0.72	-0.0
3,615,820	+		Rru_A3135	0.72	+0.2
3,615,821	-		Rru_A3135	0.72	+0.8
3,615,821	-		Rru_A3135	0.72	-0.0
3,615,821	-		Rru_A3135	0.72	+0.1