Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3117

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,594,052	+		Rru_A3116	0.43	+0.3
3,594,052	+		Rru_A3116	0.43	-0.0
3,594,053	-		Rru_A3116	0.43	+0.9
3,594,077	-		Rru_A3116	0.45	-1.3
3,594,134	-		Rru_A3116	0.48	+0.6
3,594,175	+		Rru_A3116	0.51	-0.0
3,594,193	+		Rru_A3116	0.52	+0.9
3,594,194	-		Rru_A3116	0.52	-0.0
3,594,194	-		Rru_A3116	0.52	-0.0
3,594,362	-		Rru_A3116	0.62	-0.0
3,594,382	+		Rru_A3116	0.63	-0.0
3,594,424	+		Rru_A3116	0.66	-0.1
3,594,424	+		Rru_A3116	0.66	+0.5
3,594,424	+		Rru_A3116	0.66	-0.0
3,594,424	+		Rru_A3116	0.66	-0.0
3,594,424	+		Rru_A3116	0.66	-0.0
3,594,424	+		Rru_A3116	0.66	+0.2
3,594,424	+		Rru_A3116	0.66	+0.6
3,594,425	-		Rru_A3116	0.66	+0.7
3,594,425	-		Rru_A3116	0.66	-1.6
3,594,425	-		Rru_A3116	0.66	+0.7
3,594,425	-		Rru_A3116	0.66	-0.0
3,594,425	-		Rru_A3116	0.66	-0.0
3,594,425	-		Rru_A3116	0.66	-0.0
3,594,425	-		Rru_A3116	0.66	-0.0
3,594,427	+		Rru_A3116	0.66	-0.0
3,594,428	-		Rru_A3116	0.66	-1.0
3,594,428	-		Rru_A3116	0.66	-0.0
3,594,631	+		Rru_A3116	0.79	+0.4
3,594,632	-		Rru_A3116	0.79	-0.0
3,594,632	-		Rru_A3116	0.79	+0.3
3,594,632	-		Rru_A3116	0.79	-0.0
3,594,652	+		Rru_A3116	0.80	+0.7
3,594,652	+		Rru_A3116	0.80	+1.5
3,594,653	-		Rru_A3116	0.80	+0.9
3,594,653	-		Rru_A3116	0.80	-0.0
3,594,653	-		Rru_A3116	0.80	+0.7
3,594,749	+		Rru_A3116	0.86	+0.4
3,594,749	+		Rru_A3116	0.86	+0.2
3,594,749	+		Rru_A3116	0.86	+0.1
3,594,751	+		Rru_A3116	0.86	+0.8
3,594,751	+		Rru_A3116	0.86	+0.9
3,594,751	+		Rru_A3116	0.86	+1.6
3,594,751	+		Rru_A3116	0.86	-0.0
3,594,751	+		Rru_A3116	0.86	+0.2
3,594,751	+		Rru_A3116	0.86	-0.0
3,594,751	+		Rru_A3116	0.86	+1.4
3,594,752	-		Rru_A3116	0.86	+0.6
3,594,752	-		Rru_A3116	0.86	-1.6
3,594,752	-		Rru_A3116	0.86	+0.3
3,594,752	-		Rru_A3116	0.86	+1.0
3,594,752	-		Rru_A3116	0.86	-0.0
3,594,752	-		Rru_A3116	0.86	+0.2
3,594,752	-		Rru_A3116	0.86	+0.2
3,594,752	-		Rru_A3116	0.86	-0.0
3,594,752	-		Rru_A3116	0.86	-0.0
3,594,752	-		Rru_A3116	0.86	-0.0
3,594,766	+		Rru_A3116	0.87	+1.8
3,594,766	+		Rru_A3116	0.87	+0.9
3,594,766	+		Rru_A3116	0.87	+0.2
3,594,766	+		Rru_A3116	0.87	-0.0
3,594,767	-		Rru_A3116	0.87	-0.0
3,594,767	-		Rru_A3116	0.87	-0.0
3,594,767	-		Rru_A3116	0.87	+0.8
3,594,767	-		Rru_A3116	0.87	+0.9
3,594,767	-		Rru_A3116	0.87	-0.7
3,595,018	+				-0.0
3,595,019	-				-0.0
3,595,232	-		Rru_A3117	0.34	+0.4
3,595,232	-		Rru_A3117	0.34	+0.4
3,595,336	+		Rru_A3117	0.51	-1.0
3,595,336	+		Rru_A3117	0.51	+1.0
3,595,336	+		Rru_A3117	0.51	-0.6
3,595,336	+		Rru_A3117	0.51	-0.0
3,595,336	+		Rru_A3117	0.51	-1.0
3,595,337	-		Rru_A3117	0.51	-0.0
3,595,368	+		Rru_A3117	0.56	+0.1
3,595,368	+		Rru_A3117	0.56	-0.3
3,595,369	-		Rru_A3117	0.56	+0.5
3,595,513	+		Rru_A3117	0.79	-0.0
3,595,513	+		Rru_A3117	0.79	-0.0
3,595,513	+		Rru_A3117	0.79	+0.2
3,595,513	+		Rru_A3117	0.79	-0.2
3,595,513	+		Rru_A3117	0.79	-0.0
3,595,513	+		Rru_A3117	0.79	-0.0
3,595,513	+		Rru_A3117	0.79	-0.1
3,595,514	-		Rru_A3117	0.79	-0.0
3,595,514	-		Rru_A3117	0.79	-1.0
3,595,649	+				+0.1
3,595,711	-				-0.8
3,595,711	-				-0.0
3,595,738	+				-0.1
3,595,790	-				-0.0
3,595,791	+				+0.2
3,595,856	+				-0.7
3,595,886	+				+0.1
3,595,886	+				-1.0
3,595,886	+				+0.5
3,595,887	-				-0.0
3,596,087	+				-0.0
3,596,087	+				-0.0
3,596,087	+				+1.1
3,596,087	+				-0.0
3,596,088	-				-0.0
3,596,088	-				-0.0
3,596,088	-				-0.0
3,596,108	+				+0.5
3,596,108	+				+0.6
3,596,109	-				-0.0
3,596,109	-				-0.0
3,596,109	-				+0.2
3,596,109	-				+0.5
3,596,109	-				+0.2
3,596,109	-				-0.0
3,596,300	-		Rru_A3118	0.21	-0.0
3,596,300	-		Rru_A3118	0.21	+0.5
3,596,326	+		Rru_A3118	0.23	+0.5
3,596,327	-		Rru_A3118	0.23	-1.0
3,596,338	+		Rru_A3118	0.24	-0.4
3,596,338	+		Rru_A3118	0.24	+0.3
3,596,574	-		Rru_A3118	0.39	-0.0