Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3111

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,587,108	-		Rru_A3110	0.64	+0.6
3,587,301	+		Rru_A3110	0.73	+0.7
3,587,302	-		Rru_A3110	0.73	-0.0
3,587,461	-		Rru_A3110	0.80	-1.6
3,587,631	+		Rru_A3110	0.88	+2.1
3,587,908	+				-0.0
3,587,979	-				-0.0
3,587,979	-				+0.6
3,587,979	-				+0.5
3,588,184	+		Rru_A3111	0.33	+1.0
3,588,184	+		Rru_A3111	0.33	+0.2
3,588,185	-		Rru_A3111	0.34	+0.7
3,588,313	+		Rru_A3111	0.50	-1.0
3,588,313	+		Rru_A3111	0.50	-0.0
3,588,313	+		Rru_A3111	0.50	-0.0
3,588,314	-		Rru_A3111	0.50	+1.0
3,588,314	-		Rru_A3111	0.50	-0.0
3,588,493	+		Rru_A3111	0.73	+0.3
3,588,493	+		Rru_A3111	0.73	+0.4
3,588,494	-		Rru_A3111	0.73	+0.5
3,588,610	+		Rru_A3111	0.88	+0.5
3,588,714	+				+0.5
3,588,855	+				+0.8
3,588,855	+				+2.9
3,588,856	-				-0.7
3,588,856	-				-0.0
3,588,856	-				+1.6
3,588,856	-				+0.7
3,588,856	-				-0.0
3,588,856	-				-0.0
3,588,967	+		Rru_A3112	0.17	-0.0
3,588,968	-		Rru_A3112	0.17	+0.1
3,588,968	-		Rru_A3112	0.17	-0.0
3,589,012	-		Rru_A3112	0.19	-0.8
3,589,137	+		Rru_A3112	0.27	-0.4
3,589,137	+		Rru_A3112	0.27	-1.7
3,589,137	+		Rru_A3112	0.27	+1.0
3,589,137	+		Rru_A3112	0.27	+0.3
3,589,138	-		Rru_A3112	0.27	+0.6
3,589,138	-		Rru_A3112	0.27	+1.5
3,589,138	-		Rru_A3112	0.27	+0.1
3,589,334	+		Rru_A3112	0.40	+0.5