Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3090

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,552,673	-		Rru_A3087	0.51	+0.5
3,552,673	-		Rru_A3087	0.51	-0.0
3,552,708	+		Rru_A3087	0.58	+0.1
3,552,709	-		Rru_A3087	0.59	+0.3
3,552,783	+		Rru_A3087	0.75	-1.0
3,552,810	+		Rru_A3087	0.81	-0.0
3,552,811	-		Rru_A3087	0.81	-0.0
3,552,811	-		Rru_A3087	0.81	-0.0
3,552,816	-		Rru_A3087	0.82	-0.0
3,552,816	-		Rru_A3087	0.82	-0.4
3,552,898	-				-0.0
3,552,898	-				+0.5
3,553,034	+		Rru_A3088	0.26	-0.0
3,553,035	-		Rru_A3088	0.26	-0.0
3,553,035	-		Rru_A3088	0.26	+0.5
3,553,035	-		Rru_A3088	0.26	-0.0
3,553,070	+		Rru_A3088	0.37	+0.1
3,553,199	+		Rru_A3088	0.74	-0.0
3,553,199	+		Rru_A3088	0.74	+0.3
3,553,200	-		Rru_A3088	0.74	-0.0
3,553,356	+				+0.0
3,553,356	+				+0.9
3,553,356	+				+0.0
3,553,356	+				-0.7
3,553,357	-				-0.6
3,553,357	-				+0.0
3,553,357	-				+1.3
3,553,357	-				+0.0
3,553,357	-				+0.0
3,553,357	-				+0.0
3,553,436	+				+1.8
3,553,500	+		Rru_A3089	0.30	-1.6
3,553,501	-		Rru_A3089	0.30	+0.0
3,553,512	+		Rru_A3089	0.36	+0.0
3,553,512	+		Rru_A3089	0.36	+0.0
3,553,512	+		Rru_A3089	0.36	+0.0
3,553,513	-		Rru_A3089	0.36	+0.0
3,553,513	-		Rru_A3089	0.36	+0.7
3,553,513	-		Rru_A3089	0.36	+0.4
3,553,513	-		Rru_A3089	0.36	+0.2
3,553,513	-		Rru_A3089	0.36	+0.7
3,553,513	-		Rru_A3089	0.36	+0.0
3,553,513	-		Rru_A3089	0.36	+0.6
3,553,633	-				+0.0
3,553,704	+				+0.8
3,553,705	-				+0.0
3,553,705	-				-1.6
3,553,786	+		Rru_A3090	0.14	-2.3
3,553,787	-		Rru_A3090	0.14	+0.3
3,553,787	-		Rru_A3090	0.14	+0.0
3,553,928	+		Rru_A3090	0.29	+1.0
3,553,928	+		Rru_A3090	0.29	+0.0
3,554,104	+		Rru_A3090	0.48	+0.2
3,554,104	+		Rru_A3090	0.48	+0.0
3,554,104	+		Rru_A3090	0.48	+0.0
3,554,105	-		Rru_A3090	0.48	+0.3
3,554,164	+		Rru_A3090	0.54	+1.5
3,554,164	+		Rru_A3090	0.54	+0.0
3,554,164	+		Rru_A3090	0.54	+0.8
3,554,164	+		Rru_A3090	0.54	+1.1
3,554,164	+		Rru_A3090	0.54	+0.9
3,554,165	-		Rru_A3090	0.55	+1.5
3,554,165	-		Rru_A3090	0.55	+0.9
3,554,165	-		Rru_A3090	0.55	+0.7
3,554,165	-		Rru_A3090	0.55	+0.0
3,554,731	-				-1.0
3,554,731	-				-1.6
3,554,731	-				+0.5
3,554,731	-				+0.0
3,554,731	-				-0.9
3,554,790	+				+0.0
3,554,790	+				+0.4
3,554,791	-				+1.2
3,555,312	+		Rru_A3091	0.31	+0.3
3,555,312	+		Rru_A3091	0.31	+0.1
3,555,313	-		Rru_A3091	0.31	-0.0
3,555,313	-		Rru_A3091	0.31	+0.3
3,555,342	+		Rru_A3091	0.33	-0.1
3,555,459	+		Rru_A3091	0.38	-0.0