Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3079

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,544,771	+				-0.0
3,544,779	+				+0.5
3,544,779	+				+0.1
3,544,779	+				+0.6
3,544,779	+				+0.1
3,544,780	-				+2.2
3,544,780	-				-0.0
3,544,780	-				+0.6
3,544,780	-				+1.4
3,544,872	-				+0.8
3,544,872	-				-0.0
3,544,880	+				-0.0
3,544,881	-				+0.3
3,545,424	+		Rru_A3079	0.69	+1.4
3,545,425	-		Rru_A3079	0.69	-0.0
3,545,425	-		Rru_A3079	0.69	-0.0
3,545,426	+		Rru_A3079	0.69	-0.0
3,545,433	+		Rru_A3079	0.70	+0.8
3,545,433	+		Rru_A3079	0.70	+1.3
3,545,433	+		Rru_A3079	0.70	+1.0
3,545,434	-		Rru_A3079	0.70	-0.0
3,545,434	-		Rru_A3079	0.70	+0.8
3,545,465	+		Rru_A3079	0.73	+1.9
3,545,586	+		Rru_A3079	0.87	-0.0
3,545,586	+		Rru_A3079	0.87	-0.0
3,545,586	+		Rru_A3079	0.87	-0.0
3,545,587	-		Rru_A3079	0.87	+0.2
3,545,614	-				+1.0
3,545,614	-				+0.7
3,545,658	+				-0.0
3,545,658	+				-0.0
3,545,658	+				-0.0
3,545,658	+				-0.0
3,545,658	+				-0.0
3,545,659	-				+0.7
3,545,659	-				-0.0
3,545,664	+				-0.0
3,545,664	+				+0.6
3,546,001	-		Rru_A3080	0.16	-0.0
3,546,110	-		Rru_A3080	0.26	+1.3
3,546,486	+		Rru_A3080	0.57	+0.4
3,546,555	+		Rru_A3080	0.63	-1.0
3,546,556	-		Rru_A3080	0.63	-0.0
3,546,556	-		Rru_A3080	0.63	-0.0