Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3075

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,539,786	-		Rru_A3074	0.36	+0.2
3,539,786	-		Rru_A3074	0.36	+0.1
3,540,377	-		Rru_A3074	0.74	-0.0
3,540,377	-		Rru_A3074	0.74	+0.1
3,540,377	-		Rru_A3074	0.74	+0.9
3,540,437	-		Rru_A3074	0.78	-0.0
3,540,437	-		Rru_A3074	0.78	-0.0
3,540,519	-		Rru_A3074	0.83	+0.5
3,540,716	-				-1.0
3,540,716	-				-0.0
3,541,876	-				+1.4
3,542,057	+				+2.0
3,542,057	+				+1.5
3,542,058	-				-0.5
3,542,058	-				+0.4
3,542,058	-				+0.6
3,542,058	-				-0.0
3,542,060	-				+0.5
3,542,060	-				+0.7
3,542,060	-				+0.3
3,542,112	-				+0.5
3,542,190	-				+0.4
3,542,190	-				+0.1
3,542,249	+		Rru_A3076	0.12	+0.9
3,542,249	+		Rru_A3076	0.12	+0.1
3,542,249	+		Rru_A3076	0.12	-0.0
3,542,250	-		Rru_A3076	0.12	+1.4
3,542,250	-		Rru_A3076	0.12	-0.0
3,542,250	-		Rru_A3076	0.12	-0.7
3,542,250	-		Rru_A3076	0.12	+0.4
3,542,270	+		Rru_A3076	0.15	+0.8
3,542,537	-		Rru_A3076	0.53	-0.0
3,542,537	-		Rru_A3076	0.53	+0.4
3,542,583	+		Rru_A3076	0.60	-0.0
3,542,584	-		Rru_A3076	0.60	+0.2
3,542,756	+		Rru_A3076	0.84	-0.0
3,542,777	+		Rru_A3076	0.88	+0.7
3,542,777	+		Rru_A3076	0.88	-0.2
3,542,777	+		Rru_A3076	0.88	-0.4