Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3066

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,531,464	-		Rru_A3064	0.81	-1.1
3,531,464	-		Rru_A3064	0.81	-2.3
3,531,665	-				-3.2
3,531,665	-				-2.0
3,531,665	-				-1.6
3,531,665	-				-1.7
3,531,676	+				-0.0
3,531,871	+				-0.9
3,531,872	-				-0.0
3,531,872	-				-0.0
3,531,893	+				-0.3
3,531,893	+				+1.1
3,531,893	+				-0.0
3,531,893	+				+0.3
3,531,893	+				-1.0
3,531,894	-				-0.0
3,531,894	-				-0.0
3,531,894	-				+0.3
3,531,894	-				+0.9
3,532,020	+		Rru_A3065	0.17	-0.0
3,532,020	+		Rru_A3065	0.17	-0.0
3,532,020	+		Rru_A3065	0.17	+1.0
3,532,206	+		Rru_A3065	0.80	-0.0
3,532,206	+		Rru_A3065	0.80	+0.3
3,532,207	-		Rru_A3065	0.80	+1.0
3,532,269	+				+0.5
3,532,271	+				-0.1
3,532,271	+				-0.6
3,532,283	+				-0.0
3,532,284	-				-0.0
3,532,284	-				+2.1
3,532,681	+		Rru_A3066	0.42	-0.0
3,532,681	+		Rru_A3066	0.42	+0.8
3,532,682	-		Rru_A3066	0.42	-0.4
3,532,690	+		Rru_A3066	0.44	+1.0
3,532,691	-		Rru_A3066	0.44	-0.3
3,532,691	-		Rru_A3066	0.44	+0.2
3,532,756	+		Rru_A3066	0.55	+0.5
3,532,861	+		Rru_A3066	0.72	-0.0
3,532,861	+		Rru_A3066	0.72	-0.3
3,532,862	-		Rru_A3066	0.73	-0.0
3,532,896	+		Rru_A3066	0.78	+0.6
3,532,896	+		Rru_A3066	0.78	-0.6
3,532,897	-		Rru_A3066	0.78	-0.0
3,532,897	-		Rru_A3066	0.78	+0.2
3,532,897	-		Rru_A3066	0.78	-0.3
3,532,898	+		Rru_A3066	0.79	-0.0
3,532,899	-		Rru_A3066	0.79	+0.2
3,532,925	+		Rru_A3066	0.83	+0.1
3,533,199	+		Rru_A3067	0.27	-0.0
3,533,199	+		Rru_A3067	0.27	+0.7
3,533,199	+		Rru_A3067	0.27	-0.1
3,533,199	+		Rru_A3067	0.27	-0.6
3,533,199	+		Rru_A3067	0.27	-0.0
3,533,199	+		Rru_A3067	0.27	-1.0
3,533,200	-		Rru_A3067	0.27	-0.6
3,533,200	-		Rru_A3067	0.27	-0.0
3,533,200	-		Rru_A3067	0.27	+0.2
3,533,200	-		Rru_A3067	0.27	-0.2
3,533,200	-		Rru_A3067	0.27	-0.0
3,533,200	-		Rru_A3067	0.27	+0.1
3,533,241	+		Rru_A3067	0.34	+0.7
3,533,242	-		Rru_A3067	0.34	-0.0
3,533,250	+		Rru_A3067	0.35	-0.8
3,533,251	-		Rru_A3067	0.36	-0.0
3,533,251	-		Rru_A3067	0.36	+0.9
3,533,251	-		Rru_A3067	0.36	-0.4
3,533,340	+		Rru_A3067	0.51	-0.1
3,533,340	+		Rru_A3067	0.51	+0.9
3,533,340	+		Rru_A3067	0.51	-0.0
3,533,340	+		Rru_A3067	0.51	-0.0
3,533,340	+		Rru_A3067	0.51	-0.2
3,533,340	+		Rru_A3067	0.51	-0.6
3,533,340	+		Rru_A3067	0.51	-0.0
3,533,340	+		Rru_A3067	0.51	-0.1
3,533,341	-		Rru_A3067	0.51	-0.4
3,533,341	-		Rru_A3067	0.51	+0.7
3,533,341	-		Rru_A3067	0.51	-1.0
3,533,341	-		Rru_A3067	0.51	-0.0
3,533,341	-		Rru_A3067	0.51	-0.0
3,533,341	-		Rru_A3067	0.51	-0.8
3,533,341	-		Rru_A3067	0.51	-0.0
3,533,341	-		Rru_A3067	0.51	-1.0
3,533,423	-		Rru_A3067	0.64	+1.6
3,533,434	-		Rru_A3067	0.66	-0.1
3,533,606	+				-0.2
3,533,607	-				-0.1
3,533,607	-				-0.9
3,533,634	+				-0.0
3,533,634	+				-0.1
3,533,635	-				-0.0
3,533,688	-				+0.4
3,534,011	+				-0.0