Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3060

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,523,125	+				-0.4
3,523,125	+				-0.4
3,523,125	+				-0.2
3,523,163	+		Rru_A3059	0.10	-1.0
3,523,163	+		Rru_A3059	0.10	-0.0
3,523,164	-		Rru_A3059	0.11	-0.5
3,523,167	+		Rru_A3059	0.11	-0.7
3,523,167	+		Rru_A3059	0.11	-1.0
3,523,167	+		Rru_A3059	0.11	-0.5
3,523,167	+		Rru_A3059	0.11	-1.6
3,523,167	+		Rru_A3059	0.11	-0.0
3,523,167	+		Rru_A3059	0.11	+0.4
3,523,167	+		Rru_A3059	0.11	-0.1
3,523,167	+		Rru_A3059	0.11	+0.1
3,523,168	-		Rru_A3059	0.11	-1.0
3,523,185	+		Rru_A3059	0.14	-0.0
3,523,186	-		Rru_A3059	0.14	-0.0
3,523,205	+		Rru_A3059	0.17	-0.0
3,523,205	+		Rru_A3059	0.17	+1.6
3,523,206	-		Rru_A3059	0.17	-0.0
3,523,274	+		Rru_A3059	0.27	+0.6
3,523,274	+		Rru_A3059	0.27	+1.7
3,523,275	-		Rru_A3059	0.27	-0.0
3,523,577	+		Rru_A3059	0.73	+1.8
3,523,578	-		Rru_A3059	0.73	-0.0
3,523,578	-		Rru_A3059	0.73	-0.0
3,523,685	+		Rru_A3059	0.90	-0.0
3,523,685	+		Rru_A3059	0.90	+0.8
3,523,685	+		Rru_A3059	0.90	+0.7
3,523,685	+		Rru_A3059	0.90	-0.0
3,523,685	+		Rru_A3059	0.90	-0.2
3,523,685	+		Rru_A3059	0.90	+0.4
3,523,685	+		Rru_A3059	0.90	-1.6
3,523,686	-		Rru_A3059	0.90	-0.0
3,523,686	-		Rru_A3059	0.90	-0.0
3,523,686	-		Rru_A3059	0.90	+0.7
3,523,686	-		Rru_A3059	0.90	-0.0
3,523,686	-		Rru_A3059	0.90	-0.0
3,523,686	-		Rru_A3059	0.90	+0.6
3,523,686	-		Rru_A3059	0.90	+0.8
3,523,686	-		Rru_A3059	0.90	+0.7
3,523,758	+				-0.0
3,523,759	-				-1.6
3,523,803	+				+0.4
3,523,803	+				-0.0
3,523,803	+				+0.1
3,523,804	-				+1.0
3,523,804	-				+0.4
3,523,852	+				-1.6
3,523,852	+				+0.9
3,523,852	+				+0.9
3,523,852	+				+0.5
3,523,852	+				-0.0
3,523,853	-				+0.6
3,523,853	-				-1.0
3,523,853	-				-0.0
3,523,853	-				-0.0
3,523,853	-				-0.3
3,523,943	-		Rru_A3060	0.15	+1.4
3,523,943	-		Rru_A3060	0.15	+1.1
3,523,943	-		Rru_A3060	0.15	-0.4
3,523,943	-		Rru_A3060	0.15	-0.0
3,524,124	-				+0.4
3,524,187	+				-0.0
3,524,187	+				+0.9
3,524,187	+				-0.0
3,524,188	-				-0.4
3,524,188	-				+0.9
3,524,189	+				-1.0
3,524,189	+				+1.9
3,524,189	+				+0.5
3,524,196	-				-0.0
3,524,298	-				-0.0
3,524,299	+				+0.7
3,524,299	+				-1.6
3,524,300	-				-1.6
3,524,312	-				+0.5
3,524,398	+				+0.3
3,524,444	+				+0.4
3,524,444	+				-0.0
3,524,768	+				-0.2
3,524,768	+				-0.0
3,524,769	-				+0.7
3,524,769	-				-0.0
3,524,844	-				+0.3
3,524,852	+				+0.7
3,524,853	-				+0.4
3,524,853	-				+0.3
3,525,050	+				-0.0