Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3051

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,513,188	+		Rru_A3049	0.70	-0.0
3,513,188	+		Rru_A3049	0.70	+0.3
3,513,188	+		Rru_A3049	0.70	+0.1
3,513,188	+		Rru_A3049	0.70	-0.0
3,513,188	+		Rru_A3049	0.70	-0.2
3,513,189	-		Rru_A3049	0.70	-0.0
3,513,189	-		Rru_A3049	0.70	-1.0
3,513,189	-		Rru_A3049	0.70	-0.3
3,513,189	-		Rru_A3049	0.70	-0.3
3,513,189	-		Rru_A3049	0.70	+0.8
3,513,254	+		Rru_A3049	0.75	+0.2
3,513,254	+		Rru_A3049	0.75	+1.1
3,513,296	+		Rru_A3049	0.78	+1.2
3,513,296	+		Rru_A3049	0.78	-0.0
3,513,296	+		Rru_A3049	0.78	+0.1
3,513,296	+		Rru_A3049	0.78	-0.3
3,513,296	+		Rru_A3049	0.78	+0.2
3,513,296	+		Rru_A3049	0.78	-0.0
3,513,296	+		Rru_A3049	0.78	-0.5
3,513,297	-		Rru_A3049	0.78	-0.0
3,513,297	-		Rru_A3049	0.78	+0.1
3,513,297	-		Rru_A3049	0.78	+0.1
3,513,360	-		Rru_A3049	0.83	-0.0
3,513,676	+				+2.4
3,513,677	-				-0.0
3,513,829	+		Rru_A3050	0.48	+0.2
3,513,830	-		Rru_A3050	0.48	+0.9
3,513,830	-		Rru_A3050	0.48	-2.1
3,513,830	-		Rru_A3050	0.48	-0.1
3,513,830	-		Rru_A3050	0.48	-0.1
3,513,830	-		Rru_A3050	0.48	-1.6
3,513,946	+		Rru_A3050	0.78	-0.0
3,514,015	+				+0.4
3,514,082	+				+0.6
3,514,082	+				-0.0
3,514,082	+				-0.0
3,514,082	+				-0.0
3,514,083	-				-0.3
3,514,083	-				-0.0
3,514,108	+				+0.7
3,514,108	+				-0.0
3,514,108	+				+0.1
3,514,108	+				-0.0
3,514,108	+				-1.6
3,514,108	+				-0.0
3,514,501	+		Rru_A3051	0.35	+0.5
3,514,502	-		Rru_A3051	0.35	+0.7
3,514,502	-		Rru_A3051	0.35	-0.0
3,514,836	-		Rru_A3051	0.65	+0.5
3,514,949	+		Rru_A3051	0.75	-0.0
3,514,949	+		Rru_A3051	0.75	-0.0
3,514,950	-		Rru_A3051	0.75	-0.0
3,514,950	-		Rru_A3051	0.75	-0.0
3,514,950	-		Rru_A3051	0.75	-0.6
3,514,950	-		Rru_A3051	0.75	+0.6
3,514,950	-		Rru_A3051	0.75	+0.1
3,514,950	-		Rru_A3051	0.75	+0.2
3,514,951	+		Rru_A3051	0.75	-0.4
3,514,952	-		Rru_A3051	0.75	-0.0
3,515,117	-		Rru_A3051	0.90	-0.0
3,515,134	+				+0.5
3,515,249	+				-0.0
3,515,249	+				+0.4
3,515,249	+				+1.0
3,515,249	+				-0.0
3,515,249	+				-0.0
3,515,250	-				-0.0
3,515,250	-				+0.4
3,515,250	-				-0.1
3,515,409	+				+0.1
3,515,410	-				+0.2
3,515,524	-				-0.0
3,515,524	-				-0.1
3,515,534	+				+0.9
3,515,582	+				+1.7
3,515,632	+				-0.0
3,515,633	-				-0.0
3,515,669	-		Rru_A3052	0.11	-0.0
3,515,669	-		Rru_A3052	0.11	+1.3
3,515,782	+		Rru_A3052	0.30	-0.0
3,515,782	+		Rru_A3052	0.30	-1.0
3,515,782	+		Rru_A3052	0.30	-0.0
3,515,782	+		Rru_A3052	0.30	-0.0
3,515,782	+		Rru_A3052	0.30	-0.6
3,515,783	-		Rru_A3052	0.30	-0.0
3,515,783	-		Rru_A3052	0.30	+0.4
3,515,783	-		Rru_A3052	0.30	-0.0
3,515,923	+		Rru_A3052	0.53	-0.0
3,515,923	+		Rru_A3052	0.53	-0.0
3,515,923	+		Rru_A3052	0.53	-0.0
3,516,206	-				-0.0