Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3038

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,498,929	+		Rru_A3037	0.85	+1.0
3,499,307	+				-0.4
3,499,308	-				-0.0
3,499,308	-				-0.0
3,499,309	+				-1.3
3,499,309	+				-0.0
3,499,310	-				+0.3
3,499,391	-				-0.0
3,499,391	-				-0.0
3,499,391	-				-0.0
3,499,391	-				-0.0
3,499,391	-				+0.2
3,499,391	-				-0.0
3,499,393	+				-0.7
3,499,393	+				-1.3
3,499,394	-				-0.2
3,499,394	-				-0.0
3,499,394	-				-0.0
3,499,394	-				+0.9
3,499,394	-				+0.5
3,499,394	-				-0.0
3,499,412	+				-0.2
3,499,413	-				+0.2
3,499,413	-				-0.0
3,499,413	-				-1.8
3,499,631	+		Rru_A3038	0.62	-0.0
3,499,631	+		Rru_A3038	0.62	-0.4
3,499,632	-		Rru_A3038	0.62	-1.0
3,500,108	+				+0.2
3,500,109	-				+0.2
3,500,109	-				+0.3
3,500,120	+				-0.3
3,500,121	-				-0.0
3,500,121	-				+0.3
3,500,121	-				+0.3
3,500,197	+				+0.3
3,500,258	+		Rru_A3039	0.12	+1.0
3,500,258	+		Rru_A3039	0.12	+0.5
3,500,259	-		Rru_A3039	0.12	+1.0
3,500,272	-		Rru_A3039	0.12	-0.0
3,500,272	-		Rru_A3039	0.12	+0.2
3,500,301	-		Rru_A3039	0.13	+0.5
3,500,316	-		Rru_A3039	0.14	-0.0
3,500,424	+		Rru_A3039	0.17	+0.5
3,500,424	+		Rru_A3039	0.17	-1.0
3,500,425	-		Rru_A3039	0.17	-0.0
3,500,425	-		Rru_A3039	0.17	-0.0
3,500,552	+		Rru_A3039	0.21	-0.0
3,500,552	+		Rru_A3039	0.21	+2.0
3,500,552	+		Rru_A3039	0.21	-0.0
3,500,553	-		Rru_A3039	0.21	-0.7
3,500,553	-		Rru_A3039	0.21	-0.0
3,500,736	+		Rru_A3039	0.27	-0.6
3,500,736	+		Rru_A3039	0.27	-0.0
3,500,737	-		Rru_A3039	0.27	-0.2
3,500,749	+		Rru_A3039	0.27	-0.0