Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3031

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,490,338	+				-0.7
3,490,338	+				-0.2
3,490,338	+				+0.4
3,490,339	-				+0.3
3,490,341	+				-0.2
3,490,341	+				-0.0
3,490,342	-				+0.5
3,490,601	-		Rru_A3031	0.29	-0.0
3,490,673	-		Rru_A3031	0.38	+0.6
3,491,002	+		Rru_A3031	0.81	+0.7
3,491,002	+		Rru_A3031	0.81	+0.4
3,491,002	+		Rru_A3031	0.81	-1.0
3,491,003	-		Rru_A3031	0.81	-0.0
3,491,003	-		Rru_A3031	0.81	+1.0
3,491,003	-		Rru_A3031	0.81	-0.0
3,491,008	+		Rru_A3031	0.82	-0.0
3,491,008	+		Rru_A3031	0.82	-0.0
3,491,008	+		Rru_A3031	0.82	+0.9
3,491,008	+		Rru_A3031	0.82	+0.6
3,491,008	+		Rru_A3031	0.82	+1.2
3,491,008	+		Rru_A3031	0.82	+0.8
3,491,009	-		Rru_A3031	0.82	-0.0
3,491,309	-				+0.2
3,491,309	-				+0.6
3,491,309	-				+0.5
3,491,390	+				+0.9
3,491,391	-				+0.5
3,491,391	-				-1.3
3,491,402	+				-0.0
3,491,403	-				+0.6
3,491,430	+				-0.1
3,491,431	-				+1.1
3,491,435	+				-0.0
3,491,435	+				+0.5
3,491,435	+				-2.3
3,491,435	+				+1.0
3,491,436	-				-0.0
3,491,436	-				+0.5
3,491,436	-				+0.1
3,491,436	-				-0.0
3,491,436	-				-0.0
3,491,436	-				-0.0
3,491,436	-				-0.0
3,491,439	-				-1.6
3,491,439	-				-0.0
3,491,439	-				+1.0
3,491,493	+				+1.4
3,491,493	+				-0.0
3,491,494	-				+0.7
3,491,527	+				-1.0
3,491,527	+				-1.0
3,491,536	-				-0.6
3,491,614	+				+0.7
3,491,614	+				+0.7
3,491,614	+				+1.0
3,491,615	-				+0.4
3,491,615	-				+0.0
3,491,618	+				+0.5
3,491,618	+				+0.6
3,491,618	+				-1.0
3,491,618	+				-0.8
3,491,618	+				-0.0
3,491,618	+				-0.0
3,491,618	+				-0.0
3,491,619	-				+0.2
3,491,619	-				+1.3
3,491,650	+				-0.0
3,491,650	+				+0.0
3,491,650	+				+0.1
3,491,651	-				-0.0
3,491,651	-				-1.3
3,491,651	-				-0.1
3,491,709	+				-1.0
3,491,709	+				-0.0
3,491,710	-				-0.1
3,491,710	-				-0.3
3,491,710	-				+0.2
3,491,721	+				+0.8
3,491,721	+				-0.0
3,491,722	-				-0.0
3,491,880	+		Rru_A3032	0.45	-0.0
3,491,922	+		Rru_A3032	0.57	+0.7
3,491,923	-		Rru_A3032	0.57	+0.1
3,491,997	+		Rru_A3032	0.77	-0.7
3,491,998	-		Rru_A3032	0.77	-0.0
3,491,998	-		Rru_A3032	0.77	-0.3
3,491,998	-		Rru_A3032	0.77	+0.1