Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3015

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,471,119	+		Rru_A3014	0.25	-0.5
3,471,119	+		Rru_A3014	0.25	+0.2
3,471,120	-		Rru_A3014	0.25	-0.6
3,471,120	-		Rru_A3014	0.25	-0.0
3,471,120	-		Rru_A3014	0.25	-0.0
3,471,120	-		Rru_A3014	0.25	-0.0
3,471,230	+		Rru_A3014	0.35	-0.0
3,471,230	+		Rru_A3014	0.35	-0.7
3,471,230	+		Rru_A3014	0.35	-0.0
3,471,230	+		Rru_A3014	0.35	+0.7
3,471,231	-		Rru_A3014	0.35	+0.1
3,471,231	-		Rru_A3014	0.35	-0.0
3,471,231	-		Rru_A3014	0.35	-0.0
3,471,329	+		Rru_A3014	0.44	-0.0
3,471,330	-		Rru_A3014	0.44	+1.0
3,471,330	-		Rru_A3014	0.44	-0.0
3,471,398	+		Rru_A3014	0.51	+0.9
3,471,399	-		Rru_A3014	0.51	-0.4
3,471,446	+		Rru_A3014	0.55	-0.2
3,471,447	-		Rru_A3014	0.55	+0.2
3,471,447	-		Rru_A3014	0.55	-0.0
3,471,516	-		Rru_A3014	0.61	-0.1
3,471,516	-		Rru_A3014	0.61	-0.0
3,471,516	-		Rru_A3014	0.61	-0.0
3,471,518	+		Rru_A3014	0.61	+0.3
3,471,518	+		Rru_A3014	0.61	+0.6
3,471,518	+		Rru_A3014	0.61	+0.7
3,471,519	-		Rru_A3014	0.62	-0.0
3,471,519	-		Rru_A3014	0.62	-0.0
3,471,519	-		Rru_A3014	0.62	+0.7
3,471,519	-		Rru_A3014	0.62	-0.1
3,471,529	+		Rru_A3014	0.62	-0.0
3,471,630	+		Rru_A3014	0.72	-0.0
3,471,631	-		Rru_A3014	0.72	+0.1
3,472,074	+				-0.2
3,472,074	+				-0.0
3,472,092	+				-0.0
3,472,092	+				-1.0
3,472,232	-		Rru_A3015	0.18	-0.0
3,472,232	-		Rru_A3015	0.18	-0.0
3,472,232	-		Rru_A3015	0.18	-0.0
3,472,232	-		Rru_A3015	0.18	+0.3
3,472,297	+		Rru_A3015	0.24	-0.0
3,472,298	-		Rru_A3015	0.24	-0.0
3,472,385	+		Rru_A3015	0.31	+0.0
3,472,386	-		Rru_A3015	0.31	-0.2
3,472,414	+		Rru_A3015	0.34	+0.4
3,472,415	-		Rru_A3015	0.34	-0.1
3,472,415	-		Rru_A3015	0.34	+0.1
3,472,415	-		Rru_A3015	0.34	+0.5
3,472,416	+		Rru_A3015	0.34	-0.0
3,472,416	+		Rru_A3015	0.34	-0.0
3,472,416	+		Rru_A3015	0.34	+0.2
3,472,417	-		Rru_A3015	0.34	-0.0
3,472,434	+		Rru_A3015	0.36	-0.0
3,472,435	-		Rru_A3015	0.36	-0.0
3,472,435	-		Rru_A3015	0.36	+0.2
3,472,552	+		Rru_A3015	0.46	-0.0
3,472,553	-		Rru_A3015	0.46	+0.9
3,473,032	+		Rru_A3015	0.88	-0.5
3,473,032	+		Rru_A3015	0.88	-0.6
3,473,032	+		Rru_A3015	0.88	-0.4
3,473,033	-		Rru_A3015	0.88	+0.2
3,473,033	-		Rru_A3015	0.88	-0.2
3,473,033	-		Rru_A3015	0.88	+0.4
3,473,033	-		Rru_A3015	0.88	-0.2
3,473,033	-		Rru_A3015	0.88	-0.5
3,473,034	+		Rru_A3015	0.88	-0.0
3,473,034	+		Rru_A3015	0.88	-0.6
3,473,035	-		Rru_A3015	0.88	-0.6
3,473,053	+		Rru_A3015	0.89	+1.3
3,473,053	+		Rru_A3015	0.89	+0.1
3,473,054	-		Rru_A3015	0.90	-0.0
3,473,054	-		Rru_A3015	0.90	-0.2
3,473,229	+				-0.8
3,473,229	+				-0.2
3,473,263	+				-0.1
3,473,393	+				-0.3
3,473,394	-				-0.1
3,473,790	+		Rru_A3016	0.41	+0.4
3,474,103	-		Rru_A3016	0.72	-0.0
3,474,110	+		Rru_A3016	0.73	-0.0
3,474,110	+		Rru_A3016	0.73	+0.5
3,474,110	+		Rru_A3016	0.73	-0.0
3,474,110	+		Rru_A3016	0.73	-0.0
3,474,111	-		Rru_A3016	0.73	-0.2
3,474,111	-		Rru_A3016	0.73	-0.0
3,474,111	-		Rru_A3016	0.73	+0.9
3,474,111	-		Rru_A3016	0.73	-0.0
3,474,111	-		Rru_A3016	0.73	-0.0
3,474,111	-		Rru_A3016	0.73	+3.5
3,474,111	-		Rru_A3016	0.73	+0.2
3,474,111	-		Rru_A3016	0.73	+0.3
3,474,111	-		Rru_A3016	0.73	+1.2
3,474,111	-		Rru_A3016	0.73	+0.6
3,474,111	-		Rru_A3016	0.73	-0.0
3,474,111	-		Rru_A3016	0.73	+1.4
3,474,116	+		Rru_A3016	0.73	-0.0
3,474,116	+		Rru_A3016	0.73	-0.0