Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3011

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,467,488	+				-0.0
3,467,488	+				-0.0
3,467,488	+				-0.2
3,467,488	+				-2.6
3,467,488	+				-1.0
3,467,488	+				-0.3
3,467,489	-				-0.0
3,467,489	-				+1.6
3,467,489	-				-0.0
3,467,624	+		Rru_A3010	0.13	-0.0
3,467,705	+		Rru_A3010	0.23	-0.0
3,467,705	+		Rru_A3010	0.23	-0.0
3,467,706	-		Rru_A3010	0.23	-0.0
3,467,706	-		Rru_A3010	0.23	-1.0
3,467,786	+		Rru_A3010	0.33	-0.0
3,467,801	+		Rru_A3010	0.35	-0.0
3,467,801	+		Rru_A3010	0.35	-0.0
3,467,802	-		Rru_A3010	0.35	-0.0
3,467,802	-		Rru_A3010	0.35	-0.0
3,467,802	-		Rru_A3010	0.35	-1.0
3,467,846	+		Rru_A3010	0.41	-0.0
3,467,846	+		Rru_A3010	0.41	-0.0
3,467,847	-		Rru_A3010	0.41	-0.0
3,468,119	+		Rru_A3010	0.75	-0.0
3,468,119	+		Rru_A3010	0.75	-1.0
3,468,119	+		Rru_A3010	0.75	+1.6
3,468,120	-		Rru_A3010	0.75	-0.0
3,468,120	-		Rru_A3010	0.75	-1.6
3,468,474	+				-0.4
3,468,475	-				-0.0
3,468,475	-				-0.0
3,468,475	-				-0.1
3,468,475	-				+0.8
3,468,546	-		Rru_A3011	0.17	-0.0
3,468,558	+		Rru_A3011	0.19	+1.0
3,468,559	-		Rru_A3011	0.19	-0.0
3,468,559	-		Rru_A3011	0.19	-0.3
3,468,559	-		Rru_A3011	0.19	+1.0
3,468,559	-		Rru_A3011	0.19	-1.1
3,468,609	+		Rru_A3011	0.26	+0.9
3,468,609	+		Rru_A3011	0.26	-0.0
3,468,609	+		Rru_A3011	0.26	-2.0
3,468,609	+		Rru_A3011	0.26	+1.1
3,469,086	+				+1.6
3,469,086	+				-0.0
3,469,087	-				-0.0
3,469,087	-				-0.0
3,469,122	+				+1.0
3,469,123	-				+0.5
3,469,262	+		Rru_A3012	0.13	+0.4
3,469,262	+		Rru_A3012	0.13	+0.3
3,469,263	-		Rru_A3012	0.13	+1.0
3,469,263	-		Rru_A3012	0.13	-0.0
3,469,263	-		Rru_A3012	0.13	+0.4
3,469,283	+		Rru_A3012	0.16	-0.0
3,469,285	+		Rru_A3012	0.16	-0.1
3,469,286	-		Rru_A3012	0.16	-0.0
3,469,286	-		Rru_A3012	0.16	+0.5
3,469,286	-		Rru_A3012	0.16	+1.1
3,469,286	-		Rru_A3012	0.16	+0.8
3,469,322	+		Rru_A3012	0.20	-2.0
3,469,324	+		Rru_A3012	0.21	+0.2
3,469,483	+		Rru_A3012	0.40	+0.1
3,469,483	+		Rru_A3012	0.40	+0.4
3,469,483	+		Rru_A3012	0.40	+0.4
3,469,483	+		Rru_A3012	0.40	+0.1
3,469,484	-		Rru_A3012	0.41	-1.1
3,469,484	-		Rru_A3012	0.41	+0.3
3,469,551	-		Rru_A3012	0.49	+1.7
3,469,551	-		Rru_A3012	0.49	-0.0
3,469,551	-		Rru_A3012	0.49	-0.0
3,469,675	+		Rru_A3012	0.64	-0.9
3,469,754	+		Rru_A3012	0.74	-0.0
3,469,754	+		Rru_A3012	0.74	+0.8
3,469,754	+		Rru_A3012	0.74	+0.3
3,469,755	-		Rru_A3012	0.74	+0.6
3,469,755	-		Rru_A3012	0.74	-1.0
3,469,837	+		Rru_A3012	0.84	-0.0
3,469,885	+				-0.0
3,469,886	-				-0.3
3,469,886	-				+0.1
3,469,886	-				-0.0
3,469,886	-				-0.1
3,469,886	-				-1.0
3,469,955	+				-0.0
3,469,955	+				-1.0
3,469,956	-				-0.0
3,470,091	+		Rru_A3013	0.14	-0.0
3,470,092	-		Rru_A3013	0.14	-0.0