Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3007

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,463,982	+		Rru_A3006	0.65	+1.0
3,463,983	-		Rru_A3006	0.65	-0.0
3,463,984	+		Rru_A3006	0.65	-0.0
3,463,984	+		Rru_A3006	0.65	+0.4
3,464,140	+		Rru_A3006	0.72	+0.2
3,464,140	+		Rru_A3006	0.72	-0.0
3,464,141	-		Rru_A3006	0.72	+0.8
3,464,141	-		Rru_A3006	0.72	-0.4
3,464,204	-		Rru_A3006	0.76	+0.5
3,464,212	+		Rru_A3006	0.76	-0.2
3,464,212	+		Rru_A3006	0.76	+0.5
3,464,213	-		Rru_A3006	0.76	+0.4
3,464,213	-		Rru_A3006	0.76	+0.1
3,464,213	-		Rru_A3006	0.76	-0.0
3,464,222	+		Rru_A3006	0.76	-0.0
3,464,222	+		Rru_A3006	0.76	-0.0
3,464,222	+		Rru_A3006	0.76	-1.2
3,464,222	+		Rru_A3006	0.76	-0.0
3,464,223	-		Rru_A3006	0.76	+0.7
3,464,223	-		Rru_A3006	0.76	+0.6
3,464,224	+		Rru_A3006	0.77	-0.0
3,464,224	+		Rru_A3006	0.77	-0.7
3,464,225	-		Rru_A3006	0.77	-0.8
3,464,691	+				+0.3
3,464,691	+				+0.1
3,464,692	-				-0.0
3,464,755	-				-0.0
3,464,869	+				-0.0
3,464,870	-				+0.1
3,464,870	-				+0.7
3,464,870	-				+0.3
3,464,870	-				-0.0
3,464,870	-				-0.2
3,464,872	+				-0.0
3,464,872	+				-0.0
3,464,872	+				-0.0
3,464,873	-				-0.0
3,464,873	-				+0.4
3,464,986	+				+1.3
3,464,987	-				-0.0
3,465,031	+		Rru_A3007	0.16	+0.9
3,465,118	+		Rru_A3007	0.30	+0.3
3,465,118	+		Rru_A3007	0.30	+1.2
3,465,118	+		Rru_A3007	0.30	+1.2
3,465,119	-		Rru_A3007	0.30	+0.5
3,465,119	-		Rru_A3007	0.30	-1.3
3,465,120	+		Rru_A3007	0.31	+0.9
3,465,120	+		Rru_A3007	0.31	-0.0
3,465,121	-		Rru_A3007	0.31	+0.8
3,465,121	-		Rru_A3007	0.31	-0.1
3,465,457	+		Rru_A3007	0.87	+0.7
3,465,458	-		Rru_A3007	0.88	-0.7
3,465,458	-		Rru_A3007	0.88	-1.0
3,465,458	-		Rru_A3007	0.88	-0.0
3,465,458	-		Rru_A3007	0.88	-0.4
3,465,458	-		Rru_A3007	0.88	+0.1
3,465,458	-		Rru_A3007	0.88	-1.5
3,465,464	-		Rru_A3007	0.89	-0.0
3,465,464	-		Rru_A3007	0.89	+1.4
3,465,464	-		Rru_A3007	0.89	+1.3
3,465,530	-				+0.4
3,465,648	+		Rru_A3008	0.37	+0.4
3,465,845	+				+0.4
3,465,845	+				-0.0
3,465,845	+				+1.7
3,465,845	+				-0.0
3,465,846	-				+1.4
3,465,846	-				-1.0
3,466,115	+				-0.0
3,466,299	+				-0.0
3,466,300	-				-1.7
3,466,300	-				-0.0
3,466,304	+				-0.0
3,466,377	+		Rru_A3009	0.15	-0.0
3,466,378	-		Rru_A3009	0.15	-0.0