Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2988

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,440,055	+		Rru_A2987	0.19	-0.0
3,440,055	+		Rru_A2987	0.19	-1.0
3,440,121	+		Rru_A2987	0.25	-0.0
3,440,207	+		Rru_A2987	0.32	-0.0
3,440,268	+		Rru_A2987	0.38	-1.0
3,440,268	+		Rru_A2987	0.38	-0.0
3,440,268	+		Rru_A2987	0.38	-3.3
3,440,269	-		Rru_A2987	0.38	-0.0
3,440,269	-		Rru_A2987	0.38	-0.0
3,440,575	-		Rru_A2987	0.64	-0.0
3,440,862	-		Rru_A2987	0.88	-0.0
3,441,048	+				-0.0
3,441,049	-				-0.0
3,441,186	+		Rru_A2988	0.24	-0.0
3,441,330	+		Rru_A2988	0.43	-2.5
3,441,331	-		Rru_A2988	0.43	-0.0
3,441,353	+		Rru_A2988	0.46	-0.0
3,441,384	+		Rru_A2988	0.50	-1.7
3,441,385	-		Rru_A2988	0.50	-0.0
3,441,791	-				-0.0
3,441,803	+				-3.0
3,441,803	+				-0.0
3,441,803	+				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,805	+				-0.0
3,441,805	+				-0.0
3,441,805	+				-0.0
3,441,806	-				-0.0
3,441,806	-				-0.0
3,441,806	-				-0.0
3,441,982	+		Rru_A2989	0.27	-0.0
3,441,983	-		Rru_A2989	0.27	-2.0
3,442,045	+		Rru_A2989	0.35	-1.0
3,442,430	-		Rru_A2989	0.85	-2.0
3,442,430	-		Rru_A2989	0.85	-0.0
3,442,437	-		Rru_A2989	0.86	-0.0
3,442,438	+		Rru_A2989	0.86	-0.0
3,442,438	+		Rru_A2989	0.86	-0.0
3,442,439	-		Rru_A2989	0.86	-0.0
3,442,439	-		Rru_A2989	0.86	-0.0
3,442,659	+		Rru_A2990	0.16	-0.0
3,442,659	+		Rru_A2990	0.16	-0.0
3,442,659	+		Rru_A2990	0.16	-3.0
3,442,660	-		Rru_A2990	0.16	-0.0
3,442,660	-		Rru_A2990	0.16	-0.0
3,442,703	+		Rru_A2990	0.22	-0.0
3,442,704	-		Rru_A2990	0.22	-0.0