Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2987

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,438,869	+		Rru_A2986	0.32	-3.0
3,438,869	+		Rru_A2986	0.32	-1.0
3,438,869	+		Rru_A2986	0.32	-0.0
3,438,869	+		Rru_A2986	0.32	-0.0
3,438,869	+		Rru_A2986	0.32	-0.0
3,438,869	+		Rru_A2986	0.32	-1.0
3,438,870	-		Rru_A2986	0.32	-0.0
3,438,870	-		Rru_A2986	0.32	-0.0
3,438,870	-		Rru_A2986	0.32	-0.0
3,439,025	+		Rru_A2986	0.43	-0.0
3,439,313	+		Rru_A2986	0.63	-1.0
3,439,313	+		Rru_A2986	0.63	-1.0
3,439,409	+		Rru_A2986	0.70	-1.6
3,439,496	+		Rru_A2986	0.76	-2.0
3,439,496	+		Rru_A2986	0.76	-0.0
3,439,496	+		Rru_A2986	0.76	-0.0
3,439,496	+		Rru_A2986	0.76	-1.3
3,439,498	+		Rru_A2986	0.76	-0.0
3,439,499	-		Rru_A2986	0.76	-0.0
3,439,546	+		Rru_A2986	0.79	-2.0
3,439,613	+		Rru_A2986	0.84	-1.0
3,439,614	-		Rru_A2986	0.84	-0.0
3,439,757	+				-0.0
3,439,758	-				-0.0
3,439,791	+				-2.2
3,439,915	+				-1.0
3,439,916	-				-0.0
3,440,055	+		Rru_A2987	0.19	-0.0
3,440,055	+		Rru_A2987	0.19	-1.0
3,440,121	+		Rru_A2987	0.25	-0.0
3,440,207	+		Rru_A2987	0.32	-0.0
3,440,268	+		Rru_A2987	0.38	-1.0
3,440,268	+		Rru_A2987	0.38	-0.0
3,440,268	+		Rru_A2987	0.38	-3.3
3,440,269	-		Rru_A2987	0.38	-0.0
3,440,269	-		Rru_A2987	0.38	-0.0
3,440,575	-		Rru_A2987	0.64	-0.0
3,440,862	-		Rru_A2987	0.88	-0.0
3,441,048	+				-0.0
3,441,049	-				-0.0
3,441,186	+		Rru_A2988	0.24	-0.0
3,441,330	+		Rru_A2988	0.43	-2.5
3,441,331	-		Rru_A2988	0.43	-0.0
3,441,353	+		Rru_A2988	0.46	-0.0
3,441,384	+		Rru_A2988	0.50	-1.7
3,441,385	-		Rru_A2988	0.50	-0.0
3,441,791	-				-0.0
3,441,803	+				-3.0
3,441,803	+				-0.0
3,441,803	+				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,804	-				-0.0
3,441,805	+				-0.0
3,441,805	+				-0.0
3,441,805	+				-0.0
3,441,806	-				-0.0
3,441,806	-				-0.0
3,441,806	-				-0.0
3,441,982	+		Rru_A2989	0.27	-0.0
3,441,983	-		Rru_A2989	0.27	-2.0