Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2979

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,429,124	+		Rru_A2978	0.39	-1.0
3,429,124	+		Rru_A2978	0.39	-2.5
3,429,125	-		Rru_A2978	0.39	-0.0
3,429,375	-		Rru_A2978	0.57	-2.6
3,429,375	-		Rru_A2978	0.57	-0.0
3,429,375	-		Rru_A2978	0.57	-0.0
3,429,511	+		Rru_A2978	0.66	-1.3
3,429,527	+		Rru_A2978	0.67	-3.6
3,429,527	+		Rru_A2978	0.67	-1.0
3,429,528	-		Rru_A2978	0.67	+1.0
3,429,543	-		Rru_A2978	0.68	-1.3
3,429,543	-		Rru_A2978	0.68	-3.6
3,429,865	+				-0.0
3,429,865	+				-0.0
3,429,866	-				-2.7
3,429,952	+				-0.0
3,429,952	+				-0.0
3,429,953	-				-0.0
3,429,953	-				-0.0
3,429,953	-				-0.0
3,430,063	+				-2.3
3,430,063	+				-0.0
3,430,085	-				-2.4
3,430,152	+		Rru_A2979	0.11	-0.0
3,430,152	+		Rru_A2979	0.11	-0.0
3,430,153	-		Rru_A2979	0.11	-3.3
3,430,153	-		Rru_A2979	0.11	-0.0
3,430,153	-		Rru_A2979	0.11	-2.0
3,430,347	+		Rru_A2979	0.25	-0.0
3,430,347	+		Rru_A2979	0.25	-0.2
3,430,347	+		Rru_A2979	0.25	-1.0
3,430,348	-		Rru_A2979	0.25	-0.0
3,430,348	-		Rru_A2979	0.25	-0.0
3,430,348	-		Rru_A2979	0.25	-2.3
3,430,623	+		Rru_A2979	0.44	-0.0
3,430,624	-		Rru_A2979	0.44	-0.0
3,430,624	-		Rru_A2979	0.44	-1.2
3,430,624	-		Rru_A2979	0.44	-1.8
3,430,668	+		Rru_A2979	0.48	-0.7
3,430,852	-		Rru_A2979	0.61	-2.1
3,431,292	+				-0.0
3,431,521	+				-0.0
3,431,522	-				-1.6
3,431,522	-				-0.0
3,431,522	-				-0.0
3,431,522	-				-0.0
3,431,747	-		Rru_A2980	0.25	-1.0
3,431,902	+		Rru_A2980	0.41	-0.0
3,431,903	-		Rru_A2980	0.41	-1.0
3,431,903	-		Rru_A2980	0.41	-0.0
3,431,935	+		Rru_A2980	0.44	-0.0
3,431,935	+		Rru_A2980	0.44	-0.0
3,431,935	+		Rru_A2980	0.44	-0.9
3,431,935	+		Rru_A2980	0.44	-1.8
3,431,936	-		Rru_A2980	0.44	-0.0
3,431,936	-		Rru_A2980	0.44	-0.0
3,431,936	-		Rru_A2980	0.44	-0.0
3,431,936	-		Rru_A2980	0.44	-0.0
3,431,936	-		Rru_A2980	0.44	-0.0
3,432,049	+		Rru_A2980	0.56	-2.3
3,432,049	+		Rru_A2980	0.56	-2.5
3,432,049	+		Rru_A2980	0.56	-0.0
3,432,049	+		Rru_A2980	0.56	-0.0
3,432,049	+		Rru_A2980	0.56	-1.6
3,432,049	+		Rru_A2980	0.56	-0.0
3,432,104	+		Rru_A2980	0.62	-0.0
3,432,104	+		Rru_A2980	0.62	-0.0
3,432,104	+		Rru_A2980	0.62	-1.0
3,432,160	+		Rru_A2980	0.67	-0.0
3,432,161	-		Rru_A2980	0.67	-0.0
3,432,161	-		Rru_A2980	0.67	-0.0
3,432,340	+		Rru_A2980	0.86	-0.0
3,432,340	+		Rru_A2980	0.86	-3.2
3,432,340	+		Rru_A2980	0.86	-1.3
3,432,341	-		Rru_A2980	0.86	-0.0
3,432,341	-		Rru_A2980	0.86	-1.2
3,432,341	-		Rru_A2980	0.86	-2.1
3,432,341	-		Rru_A2980	0.86	-0.0
3,432,341	-		Rru_A2980	0.86	-0.3
3,432,341	-		Rru_A2980	0.86	-0.0
3,432,341	-		Rru_A2980	0.86	-0.0
3,432,341	-		Rru_A2980	0.86	-3.8
3,432,388	+				-1.6
3,432,388	+				-2.6
3,432,388	+				-1.6
3,432,388	+				-0.0
3,432,388	+				-1.0
3,432,389	-				-2.0
3,432,389	-				+1.0
3,432,389	-				-0.0