Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2978

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,427,595	+		Rru_A2975	0.73	-2.7
3,427,595	+		Rru_A2975	0.73	-0.0
3,427,596	-		Rru_A2975	0.74	-0.0
3,427,596	-		Rru_A2975	0.74	-0.0
3,427,614	+		Rru_A2975	0.76	-0.0
3,427,690	-		Rru_A2975	0.85	-2.0
3,427,690	-		Rru_A2975	0.85	-0.0
3,427,724	+		Rru_A2975	0.89	-1.5
3,427,724	+		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.6
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,787	+				-0.6
3,427,788	-				-1.0
3,427,815	+				-0.0
3,427,815	+				-3.5
3,427,815	+				-0.0
3,427,928	+				-3.2
3,427,929	-				-0.0
3,428,120	+				-1.6
3,428,121	-				-0.0
3,428,121	-				-2.2
3,428,121	-				-2.4
3,428,143	+				-0.0
3,428,307	-		Rru_A2977	0.83	-0.8
3,428,342	+				-0.0
3,428,342	+				-0.0
3,428,343	-				-3.5
3,428,350	-				-3.6
3,428,356	+				-0.0
3,428,357	-				-0.0
3,428,676	-				-3.8
3,428,676	-				-2.6
3,428,854	+		Rru_A2978	0.20	-4.2
3,428,854	+		Rru_A2978	0.20	-0.0
3,428,854	+		Rru_A2978	0.20	-0.0
3,428,855	-		Rru_A2978	0.21	-0.7
3,428,855	-		Rru_A2978	0.21	-0.0
3,428,855	-		Rru_A2978	0.21	-1.1
3,428,869	+		Rru_A2978	0.21	-0.0
3,428,932	+		Rru_A2978	0.26	-0.0
3,428,933	-		Rru_A2978	0.26	-0.0
3,428,933	-		Rru_A2978	0.26	-1.3
3,428,962	+		Rru_A2978	0.28	-1.7
3,428,962	+		Rru_A2978	0.28	-1.0
3,428,963	-		Rru_A2978	0.28	-2.4
3,428,963	-		Rru_A2978	0.28	+1.0
3,428,963	-		Rru_A2978	0.28	-3.2
3,429,124	+		Rru_A2978	0.39	-1.0
3,429,124	+		Rru_A2978	0.39	-2.5
3,429,125	-		Rru_A2978	0.39	-0.0
3,429,375	-		Rru_A2978	0.57	-2.6
3,429,375	-		Rru_A2978	0.57	-0.0
3,429,375	-		Rru_A2978	0.57	-0.0
3,429,511	+		Rru_A2978	0.66	-1.3
3,429,527	+		Rru_A2978	0.67	-3.6
3,429,527	+		Rru_A2978	0.67	-1.0
3,429,528	-		Rru_A2978	0.67	+1.0
3,429,543	-		Rru_A2978	0.68	-1.3
3,429,543	-		Rru_A2978	0.68	-3.6
3,429,865	+				-0.0
3,429,865	+				-0.0
3,429,866	-				-2.7
3,429,952	+				-0.0
3,429,952	+				-0.0
3,429,953	-				-0.0
3,429,953	-				-0.0
3,429,953	-				-0.0
3,430,063	+				-2.3
3,430,063	+				-0.0
3,430,085	-				-2.4
3,430,152	+		Rru_A2979	0.11	-0.0
3,430,152	+		Rru_A2979	0.11	-0.0
3,430,153	-		Rru_A2979	0.11	-3.3
3,430,153	-		Rru_A2979	0.11	-0.0
3,430,153	-		Rru_A2979	0.11	-2.0
3,430,347	+		Rru_A2979	0.25	-0.0
3,430,347	+		Rru_A2979	0.25	-0.2
3,430,347	+		Rru_A2979	0.25	-1.0
3,430,348	-		Rru_A2979	0.25	-0.0
3,430,348	-		Rru_A2979	0.25	-0.0
3,430,348	-		Rru_A2979	0.25	-2.3
3,430,623	+		Rru_A2979	0.44	-0.0
3,430,624	-		Rru_A2979	0.44	-0.0
3,430,624	-		Rru_A2979	0.44	-1.2
3,430,624	-		Rru_A2979	0.44	-1.8
3,430,668	+		Rru_A2979	0.48	-0.7
3,430,852	-		Rru_A2979	0.61	-2.1