Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2975

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,425,993	+				-1.2
3,426,028	+				-1.6
3,426,029	-				-0.0
3,426,034	-				-0.0
3,426,348	-		Rru_A2974	0.32	-2.6
3,426,348	-		Rru_A2974	0.32	-0.0
3,426,383	+		Rru_A2974	0.36	-2.3
3,426,383	+		Rru_A2974	0.36	-1.0
3,426,383	+		Rru_A2974	0.36	-1.6
3,426,384	-		Rru_A2974	0.36	-1.6
3,426,399	-		Rru_A2974	0.38	-3.2
3,426,399	-		Rru_A2974	0.38	-1.0
3,426,576	-		Rru_A2974	0.57	-1.7
3,426,576	-		Rru_A2974	0.57	-1.0
3,426,671	+		Rru_A2974	0.67	-0.0
3,426,671	+		Rru_A2974	0.67	-1.7
3,426,821	+		Rru_A2974	0.83	-0.0
3,426,821	+		Rru_A2974	0.83	-2.1
3,426,821	+		Rru_A2974	0.83	-1.2
3,426,821	+		Rru_A2974	0.83	-1.9
3,426,821	+		Rru_A2974	0.83	-3.1
3,426,822	-		Rru_A2974	0.84	-1.6
3,426,852	+		Rru_A2974	0.87	-0.0
3,426,853	-		Rru_A2974	0.87	-0.0
3,426,863	+		Rru_A2974	0.88	-3.0
3,426,863	+		Rru_A2974	0.88	-0.0
3,426,910	-				-2.0
3,426,931	-				-1.0
3,426,954	+				-1.0
3,426,954	+				-3.8
3,426,955	-				-0.0
3,426,979	-				-0.0
3,427,050	-				-1.0
3,427,050	-				-0.0
3,427,110	+		Rru_A2975	0.15	-0.0
3,427,110	+		Rru_A2975	0.15	-3.7
3,427,110	+		Rru_A2975	0.15	-1.0
3,427,111	-		Rru_A2975	0.15	-0.0
3,427,170	-		Rru_A2975	0.22	-1.5
3,427,282	-		Rru_A2975	0.36	-3.9
3,427,282	-		Rru_A2975	0.36	-0.0
3,427,307	+		Rru_A2975	0.39	-1.0
3,427,307	+		Rru_A2975	0.39	-0.0
3,427,308	-		Rru_A2975	0.39	-0.0
3,427,371	-		Rru_A2975	0.46	-1.0
3,427,430	+		Rru_A2975	0.54	-0.0
3,427,430	+		Rru_A2975	0.54	+1.0
3,427,430	+		Rru_A2975	0.54	-0.0
3,427,545	+		Rru_A2975	0.67	-3.2
3,427,546	-		Rru_A2975	0.68	-0.0
3,427,546	-		Rru_A2975	0.68	-0.0
3,427,548	+		Rru_A2975	0.68	-2.3
3,427,548	+		Rru_A2975	0.68	-2.8
3,427,548	+		Rru_A2975	0.68	-1.0
3,427,548	+		Rru_A2975	0.68	-3.2
3,427,548	+		Rru_A2975	0.68	-2.5
3,427,548	+		Rru_A2975	0.68	-3.9
3,427,548	+		Rru_A2975	0.68	-0.0
3,427,549	-		Rru_A2975	0.68	-2.4
3,427,549	-		Rru_A2975	0.68	-1.6
3,427,549	-		Rru_A2975	0.68	-0.0
3,427,549	-		Rru_A2975	0.68	-0.9
3,427,549	-		Rru_A2975	0.68	-0.0
3,427,595	+		Rru_A2975	0.73	-2.7
3,427,595	+		Rru_A2975	0.73	-0.0
3,427,596	-		Rru_A2975	0.74	-0.0
3,427,596	-		Rru_A2975	0.74	-0.0
3,427,614	+		Rru_A2975	0.76	-0.0
3,427,690	-		Rru_A2975	0.85	-2.0
3,427,690	-		Rru_A2975	0.85	-0.0
3,427,724	+		Rru_A2975	0.89	-1.5
3,427,724	+		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,725	-		Rru_A2975	0.89	-0.6
3,427,725	-		Rru_A2975	0.89	-0.0
3,427,787	+				-0.6
3,427,788	-				-1.0
3,427,815	+				-0.0
3,427,815	+				-3.5
3,427,815	+				-0.0
3,427,928	+				-3.2
3,427,929	-				-0.0
3,428,120	+				-1.6
3,428,121	-				-0.0
3,428,121	-				-2.2
3,428,121	-				-2.4
3,428,143	+				-0.0
3,428,307	-		Rru_A2977	0.83	-0.8
3,428,342	+				-0.0
3,428,342	+				-0.0
3,428,343	-				-3.5
3,428,350	-				-3.6
3,428,356	+				-0.0
3,428,357	-				-0.0
3,428,676	-				-3.8
3,428,676	-				-2.6