Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2971

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,420,519	-		Rru_A2970	0.11	+1.6
3,420,686	+		Rru_A2970	0.33	+1.0
3,420,686	+		Rru_A2970	0.33	+0.3
3,420,686	+		Rru_A2970	0.33	-0.0
3,420,686	+		Rru_A2970	0.33	+0.1
3,420,687	-		Rru_A2970	0.33	-0.9
3,420,687	-		Rru_A2970	0.33	+0.4
3,420,687	-		Rru_A2970	0.33	+0.7
3,420,687	-		Rru_A2970	0.33	-0.0
3,420,687	-		Rru_A2970	0.33	-0.0
3,420,782	+		Rru_A2970	0.45	+1.0
3,420,782	+		Rru_A2970	0.45	-0.0
3,420,782	+		Rru_A2970	0.45	-0.6
3,420,813	+		Rru_A2970	0.49	+0.4
3,420,814	-		Rru_A2970	0.49	-1.1
3,420,814	-		Rru_A2970	0.49	-0.0
3,420,814	-		Rru_A2970	0.49	-1.0
3,420,843	-		Rru_A2970	0.53	-0.0
3,420,843	-		Rru_A2970	0.53	+0.1
3,421,043	+		Rru_A2970	0.79	+0.5
3,421,043	+		Rru_A2970	0.79	-0.0
3,421,043	+		Rru_A2970	0.79	-0.0
3,421,044	-		Rru_A2970	0.79	+0.1
3,421,044	-		Rru_A2970	0.79	-0.1
3,421,044	-		Rru_A2970	0.79	+0.4
3,421,044	-		Rru_A2970	0.79	-0.0
3,421,169	+				-0.4
3,421,169	+				-0.2
3,421,169	+				+0.8
3,421,169	+				-0.0
3,421,169	+				+0.9
3,421,169	+				-1.0
3,421,169	+				-0.0
3,421,169	+				-0.0
3,421,169	+				-0.0
3,421,170	-				+1.1
3,421,170	-				+0.8
3,421,170	-				-1.6
3,421,170	-				-0.0
3,421,170	-				-0.0
3,421,170	-				-1.3
3,421,170	-				-0.0
3,421,170	-				-0.7
3,421,170	-				-0.5
3,421,170	-				-3.2
3,421,170	-				-0.0
3,421,170	-				-0.2
3,421,170	-				-0.0
3,421,170	-				-2.6
3,421,170	-				+0.9
3,421,206	-				-0.0
3,421,365	-		Rru_A2971	0.13	+1.0
3,421,679	+		Rru_A2971	0.39	+0.5
3,421,679	+		Rru_A2971	0.39	+0.2
3,421,680	-		Rru_A2971	0.39	+1.0
3,421,680	-		Rru_A2971	0.39	+1.0
3,421,715	+		Rru_A2971	0.41	-0.0
3,421,715	+		Rru_A2971	0.41	+1.0
3,421,716	-		Rru_A2971	0.42	-0.0
3,421,716	-		Rru_A2971	0.42	-0.0
3,421,755	+		Rru_A2971	0.45	+0.4
3,421,755	+		Rru_A2971	0.45	-0.0
3,421,755	+		Rru_A2971	0.45	+0.1
3,421,755	+		Rru_A2971	0.45	-0.2
3,421,755	+		Rru_A2971	0.45	-0.0
3,421,756	-		Rru_A2971	0.45	-0.6
3,421,756	-		Rru_A2971	0.45	+0.5
3,421,756	-		Rru_A2971	0.45	+0.4
3,421,757	+		Rru_A2971	0.45	+0.6
3,422,156	+		Rru_A2971	0.77	+0.7
3,422,156	+		Rru_A2971	0.77	+0.9
3,422,156	+		Rru_A2971	0.77	+1.2
3,422,156	+		Rru_A2971	0.77	+1.8
3,422,156	+		Rru_A2971	0.77	+0.9
3,422,157	-		Rru_A2971	0.77	+2.6
3,422,157	-		Rru_A2971	0.77	-0.2
3,422,157	-		Rru_A2971	0.77	-0.0
3,422,157	-		Rru_A2971	0.77	-0.1
3,422,249	+		Rru_A2971	0.85	-0.5
3,422,250	-		Rru_A2971	0.85	+0.7
3,422,250	-		Rru_A2971	0.85	+1.0
3,422,492	+				-0.0
3,422,492	+				-0.0
3,422,492	+				-0.5
3,422,492	+				-1.0
3,422,492	+				-0.0
3,422,493	-				+0.6
3,422,493	-				+0.2
3,422,493	-				-0.0
3,422,493	-				-0.0
3,422,840	+		Rru_A2972	0.14	-0.0
3,422,841	-		Rru_A2972	0.14	+0.4
3,422,841	-		Rru_A2972	0.14	-1.0
3,423,008	+		Rru_A2972	0.26	-0.0
3,423,009	-		Rru_A2972	0.26	-0.0
3,423,193	-		Rru_A2972	0.39	-0.0
3,423,209	+		Rru_A2972	0.41	-0.7
3,423,209	+		Rru_A2972	0.41	+0.2
3,423,209	+		Rru_A2972	0.41	-0.0
3,423,211	+		Rru_A2972	0.41	-1.6
3,423,211	+		Rru_A2972	0.41	-0.0
3,423,211	+		Rru_A2972	0.41	-0.0
3,423,211	+		Rru_A2972	0.41	-0.0
3,423,212	-		Rru_A2972	0.41	-0.0
3,423,212	-		Rru_A2972	0.41	-0.0
3,423,278	+		Rru_A2972	0.46	-1.0
3,423,279	-		Rru_A2972	0.46	-0.0
3,423,279	-		Rru_A2972	0.46	-0.0
3,423,279	-		Rru_A2972	0.46	+0.8
3,423,279	-		Rru_A2972	0.46	+0.8
3,423,287	+		Rru_A2972	0.46	+0.3
3,423,287	+		Rru_A2972	0.46	-0.0
3,423,288	-		Rru_A2972	0.46	-1.0
3,423,290	+		Rru_A2972	0.47	-0.0
3,423,368	+		Rru_A2972	0.52	-0.0
3,423,368	+		Rru_A2972	0.52	+0.3