Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2969

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,419,769	+				+1.0
3,419,769	+				+0.8
3,419,770	-				-0.0
3,419,863	+		Rru_A2969	0.16	-0.2
3,419,863	+		Rru_A2969	0.16	+0.1
3,419,863	+		Rru_A2969	0.16	+1.4
3,419,864	-		Rru_A2969	0.16	-1.0
3,419,864	-		Rru_A2969	0.16	-0.0
3,419,864	-		Rru_A2969	0.16	-0.0
3,419,953	+		Rru_A2969	0.30	-0.0
3,419,953	+		Rru_A2969	0.30	+0.8
3,419,953	+		Rru_A2969	0.30	+1.1
3,419,953	+		Rru_A2969	0.30	+1.0
3,419,953	+		Rru_A2969	0.30	-0.0
3,419,978	+		Rru_A2969	0.34	-0.0
3,419,979	-		Rru_A2969	0.34	-0.0
3,420,519	-		Rru_A2970	0.11	+1.6
3,420,686	+		Rru_A2970	0.33	+1.0
3,420,686	+		Rru_A2970	0.33	+0.3
3,420,686	+		Rru_A2970	0.33	-0.0
3,420,686	+		Rru_A2970	0.33	+0.1
3,420,687	-		Rru_A2970	0.33	-0.9
3,420,687	-		Rru_A2970	0.33	+0.4
3,420,687	-		Rru_A2970	0.33	+0.7
3,420,687	-		Rru_A2970	0.33	-0.0
3,420,687	-		Rru_A2970	0.33	-0.0
3,420,782	+		Rru_A2970	0.45	+1.0
3,420,782	+		Rru_A2970	0.45	-0.0
3,420,782	+		Rru_A2970	0.45	-0.6
3,420,813	+		Rru_A2970	0.49	+0.4
3,420,814	-		Rru_A2970	0.49	-1.1
3,420,814	-		Rru_A2970	0.49	-0.0
3,420,814	-		Rru_A2970	0.49	-1.0
3,420,843	-		Rru_A2970	0.53	-0.0
3,420,843	-		Rru_A2970	0.53	+0.1
3,421,043	+		Rru_A2970	0.79	+0.5
3,421,043	+		Rru_A2970	0.79	-0.0
3,421,043	+		Rru_A2970	0.79	-0.0
3,421,044	-		Rru_A2970	0.79	+0.1
3,421,044	-		Rru_A2970	0.79	-0.1
3,421,044	-		Rru_A2970	0.79	+0.4
3,421,044	-		Rru_A2970	0.79	-0.0
3,421,169	+				-0.4
3,421,169	+				-0.2
3,421,169	+				+0.8
3,421,169	+				-0.0
3,421,169	+				+0.9
3,421,169	+				-1.0
3,421,169	+				-0.0
3,421,169	+				-0.0
3,421,169	+				-0.0
3,421,170	-				+1.1
3,421,170	-				+0.8
3,421,170	-				-1.6
3,421,170	-				-0.0
3,421,170	-				-0.0
3,421,170	-				-1.3
3,421,170	-				-0.0
3,421,170	-				-0.7
3,421,170	-				-0.5
3,421,170	-				-3.2
3,421,170	-				-0.0
3,421,170	-				-0.2
3,421,170	-				-0.0
3,421,170	-				-2.6
3,421,170	-				+0.9
3,421,206	-				-0.0
3,421,365	-		Rru_A2971	0.13	+1.0