Strain Fitness in Rhodospirillum rubrum S1H around Rru_AR0054

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,377,892	+				-0.0
3,377,933	+				-0.0
3,378,273	+		Rru_AR0054	0.24	+1.2
3,378,274	-		Rru_AR0054	0.25	-0.0
3,378,434	+				-0.0
3,378,434	+				-0.0
3,378,435	-				-0.0
3,378,503	-		Rru_AR0055	0.11	-0.6
3,378,529	+		Rru_AR0055	0.45	-0.0
3,378,585	+				-0.0
3,378,585	+				+1.0
3,378,586	-				-0.0
3,378,586	-				-0.2
3,378,586	-				-0.5
3,378,697	+				-0.0
3,378,698	-				+0.7
3,378,709	+				+0.5
3,378,785	+				-0.0
3,378,785	+				+0.7
3,378,785	+				+0.2
3,378,786	-				-0.0
3,378,861	+				+0.8
3,378,861	+				+2.2
3,378,862	-				+0.2
3,378,862	-				-0.5
3,378,862	-				+0.1
3,379,012	-		Rru_A2933	0.36	+0.2
3,379,012	-		Rru_A2933	0.36	-0.6
3,379,012	-		Rru_A2933	0.36	-0.0
3,379,012	-		Rru_A2933	0.36	-0.1
3,379,029	+		Rru_A2933	0.39	-0.0
3,379,030	-		Rru_A2933	0.40	-0.6
3,379,089	+		Rru_A2933	0.50	+1.3
3,379,089	+		Rru_A2933	0.50	+0.2
3,379,089	+		Rru_A2933	0.50	+0.8
3,379,090	-		Rru_A2933	0.50	+0.3
3,379,090	-		Rru_A2933	0.50	-0.0
3,379,090	-		Rru_A2933	0.50	+0.2
3,379,090	-		Rru_A2933	0.50	-0.0