Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2913

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,355,185	+				+0.0
3,355,186	-				-1.0
3,355,186	-				-0.2
3,355,208	+				+0.0
3,355,208	+				+0.0
3,355,208	+				-0.8
3,355,209	-				-1.0
3,355,256	-				+0.5
3,355,630	+		Rru_A2912	0.40	+0.2
3,355,631	-		Rru_A2912	0.40	+0.3
3,355,631	-		Rru_A2912	0.40	+0.4
3,355,631	-		Rru_A2912	0.40	+0.0
3,355,631	-		Rru_A2912	0.40	+0.0
3,355,988	+		Rru_A2912	0.85	+0.6
3,356,115	+				+0.9
3,356,115	+				-0.4
3,356,115	+				+1.0
3,356,116	-				-0.2
3,356,116	-				+0.5
3,356,296	+		Rru_A2913	0.19	+0.5
3,356,296	+		Rru_A2913	0.19	+2.1
3,356,296	+		Rru_A2913	0.19	+0.4
3,356,296	+		Rru_A2913	0.19	-1.0
3,356,297	-		Rru_A2913	0.19	+1.1
3,356,297	-		Rru_A2913	0.19	+1.4
3,356,297	-		Rru_A2913	0.19	+0.0
3,356,297	-		Rru_A2913	0.19	+0.0
3,356,297	-		Rru_A2913	0.19	+0.7
3,356,297	-		Rru_A2913	0.19	+1.2
3,356,297	-		Rru_A2913	0.19	+0.9
3,356,297	-		Rru_A2913	0.19	+0.7
3,356,456	-		Rru_A2913	0.43	-0.7
3,356,456	-		Rru_A2913	0.43	+0.0
3,356,456	-		Rru_A2913	0.43	+0.4
3,356,647	+		Rru_A2913	0.71	+0.8
3,356,647	+		Rru_A2913	0.71	+0.1
3,356,647	+		Rru_A2913	0.71	-0.6
3,356,648	-		Rru_A2913	0.71	-0.6
3,356,710	+		Rru_A2913	0.80	+0.4
3,356,710	+		Rru_A2913	0.80	+0.0
3,356,710	+		Rru_A2913	0.80	+0.0
3,356,710	+		Rru_A2913	0.80	-1.6
3,356,711	-		Rru_A2913	0.80	+0.0
3,356,748	+		Rru_A2913	0.85	+1.6
3,356,749	-		Rru_A2913	0.86	+0.7
3,356,749	-		Rru_A2913	0.86	+0.0
3,356,749	-		Rru_A2913	0.86	+0.4
3,356,821	+				-1.4
3,356,845	+				+0.3
3,356,845	+				-1.6
3,356,845	+				+0.0
3,356,846	-				+0.0
3,356,846	-				+0.0
3,356,883	+				+0.3
3,356,883	+				-1.0
3,356,883	+				-1.0
3,356,883	+				+0.3
3,356,884	-				+0.0
3,356,884	-				-0.3
3,356,896	+				+0.1
3,356,896	+				+0.8
3,356,897	-				-0.8
3,356,948	+				+0.0
3,357,105	-		Rru_A2914	0.17	+0.0
3,357,105	-		Rru_A2914	0.17	+0.5
3,357,168	+		Rru_A2914	0.21	+0.0