Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2901

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,343,104	+		Rru_A2900	0.32	-0.0
3,343,104	+		Rru_A2900	0.32	+0.2
3,343,104	+		Rru_A2900	0.32	-0.0
3,343,104	+		Rru_A2900	0.32	+0.2
3,343,104	+		Rru_A2900	0.32	+0.3
3,343,104	+		Rru_A2900	0.32	+0.9
3,343,105	-		Rru_A2900	0.32	+0.3
3,343,105	-		Rru_A2900	0.32	+0.6
3,343,105	-		Rru_A2900	0.32	+0.7
3,343,105	-		Rru_A2900	0.32	+1.2
3,343,201	-		Rru_A2900	0.43	+0.7
3,343,449	+		Rru_A2900	0.69	+0.6
3,343,449	+		Rru_A2900	0.69	-1.0
3,343,449	+		Rru_A2900	0.69	+0.4
3,343,449	+		Rru_A2900	0.69	-0.0
3,343,450	-		Rru_A2900	0.69	+1.0
3,343,450	-		Rru_A2900	0.69	+0.9
3,343,450	-		Rru_A2900	0.69	-0.0
3,343,450	-		Rru_A2900	0.69	-0.3
3,343,450	-		Rru_A2900	0.69	+0.9
3,343,450	-		Rru_A2900	0.69	-0.2
3,343,463	-		Rru_A2900	0.71	-0.0
3,343,465	-		Rru_A2900	0.71	+1.1
3,343,465	-		Rru_A2900	0.71	-0.0
3,343,678	+				-0.7
3,343,678	+				-0.0
3,343,678	+				+0.8
3,343,678	+				-0.0
3,343,678	+				+0.7
3,343,751	+				-0.0
3,343,753	+				+0.1
3,343,754	-				-0.3
3,343,754	-				-0.6
3,343,754	-				-0.0
3,343,754	-				+0.9
3,343,754	-				-1.6
3,343,904	+				-1.0
3,343,904	+				+0.2
3,343,905	-				-0.0
3,343,941	-				-0.2
3,344,277	-		Rru_A2901	0.51	-0.0
3,344,277	-		Rru_A2901	0.51	-0.0
3,344,397	+		Rru_A2901	0.78	-0.0
3,344,398	-		Rru_A2901	0.78	-0.0
3,344,777	+		Rru_A2902	0.44	-0.0
3,345,027	+		Rru_A2902	0.83	-0.0
3,345,028	-		Rru_A2902	0.83	-0.0
3,345,154	-				-0.0
3,345,154	-				+0.1
3,345,225	+				-1.4
3,345,226	-				-0.0
3,345,226	-				-0.1
3,345,240	+				-0.0
3,345,240	+				+0.1
3,345,274	+				+0.7
3,345,274	+				-0.0
3,345,275	-				-0.0
3,345,275	-				-0.8
3,345,377	+				+0.5
3,345,377	+				+0.5
3,345,377	+				-0.0
3,345,378	-				+0.4