Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2900

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,342,043	+		Rru_A2899	0.58	-0.0
3,342,043	+		Rru_A2899	0.58	-0.0
3,342,043	+		Rru_A2899	0.58	+3.5
3,342,044	-		Rru_A2899	0.58	-0.0
3,342,044	-		Rru_A2899	0.58	-0.0
3,342,130	+		Rru_A2899	0.67	-0.0
3,342,162	+		Rru_A2899	0.70	+3.1
3,342,163	-		Rru_A2899	0.70	-0.0
3,342,163	-		Rru_A2899	0.70	+3.2
3,342,219	+		Rru_A2899	0.76	-0.0
3,342,235	+		Rru_A2899	0.77	-0.0
3,342,235	+		Rru_A2899	0.77	+1.7
3,342,235	+		Rru_A2899	0.77	+2.0
3,342,235	+		Rru_A2899	0.77	+3.2
3,342,235	+		Rru_A2899	0.77	+1.0
3,342,236	-		Rru_A2899	0.78	-0.0
3,342,236	-		Rru_A2899	0.78	-0.0
3,342,236	-		Rru_A2899	0.78	-0.0
3,342,367	+				-0.0
3,342,719	+				-1.0
3,342,719	+				+3.1
3,342,719	+				+3.0
3,342,719	+				+2.2
3,342,719	+				-0.0
3,342,719	+				+2.1
3,342,720	-				-1.6
3,342,720	-				+1.6
3,342,720	-				+1.5
3,342,720	-				+1.6
3,342,720	-				-0.0
3,342,720	-				+1.2
3,342,720	-				-0.0
3,342,880	+				+0.1
3,342,881	-				-1.6
3,342,881	-				-0.0
3,342,881	-				-0.0
3,342,886	-				+1.0
3,342,886	-				+0.3
3,342,952	+		Rru_A2900	0.16	+1.0
3,342,953	-		Rru_A2900	0.16	-0.0
3,342,953	-		Rru_A2900	0.16	-0.0
3,342,954	+		Rru_A2900	0.16	+0.6
3,342,954	+		Rru_A2900	0.16	-0.0
3,342,955	-		Rru_A2900	0.16	-0.0
3,342,955	-		Rru_A2900	0.16	+0.4
3,343,006	-		Rru_A2900	0.22	-0.4
3,343,036	+		Rru_A2900	0.25	+0.9
3,343,037	-		Rru_A2900	0.25	-0.0
3,343,038	+		Rru_A2900	0.25	-0.0
3,343,039	-		Rru_A2900	0.25	-0.0
3,343,104	+		Rru_A2900	0.32	-0.0
3,343,104	+		Rru_A2900	0.32	+0.2
3,343,104	+		Rru_A2900	0.32	-0.0
3,343,104	+		Rru_A2900	0.32	+0.2
3,343,104	+		Rru_A2900	0.32	+0.3
3,343,104	+		Rru_A2900	0.32	+0.9
3,343,105	-		Rru_A2900	0.32	+0.3
3,343,105	-		Rru_A2900	0.32	+0.6
3,343,105	-		Rru_A2900	0.32	+0.7
3,343,105	-		Rru_A2900	0.32	+1.2
3,343,201	-		Rru_A2900	0.43	+0.7
3,343,449	+		Rru_A2900	0.69	+0.6
3,343,449	+		Rru_A2900	0.69	-1.0
3,343,449	+		Rru_A2900	0.69	+0.4
3,343,449	+		Rru_A2900	0.69	-0.0
3,343,450	-		Rru_A2900	0.69	+1.0
3,343,450	-		Rru_A2900	0.69	+0.9
3,343,450	-		Rru_A2900	0.69	-0.0
3,343,450	-		Rru_A2900	0.69	-0.3
3,343,450	-		Rru_A2900	0.69	+0.9
3,343,450	-		Rru_A2900	0.69	-0.2
3,343,463	-		Rru_A2900	0.71	-0.0
3,343,465	-		Rru_A2900	0.71	+1.1
3,343,465	-		Rru_A2900	0.71	-0.0
3,343,678	+				-0.7
3,343,678	+				-0.0
3,343,678	+				+0.8
3,343,678	+				-0.0
3,343,678	+				+0.7
3,343,751	+				-0.0
3,343,753	+				+0.1
3,343,754	-				-0.3
3,343,754	-				-0.6
3,343,754	-				-0.0
3,343,754	-				+0.9
3,343,754	-				-1.6
3,343,904	+				-1.0
3,343,904	+				+0.2
3,343,905	-				-0.0
3,343,941	-				-0.2
3,344,277	-		Rru_A2901	0.51	-0.0
3,344,277	-		Rru_A2901	0.51	-0.0
3,344,397	+		Rru_A2901	0.78	-0.0
3,344,398	-		Rru_A2901	0.78	-0.0