Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2894

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,336,284	+		Rru_A2893	0.17	+0.6
3,336,618	+		Rru_A2893	0.56	+0.6
3,336,618	+		Rru_A2893	0.56	-0.0
3,336,619	-		Rru_A2893	0.56	-1.5
3,336,619	-		Rru_A2893	0.56	-1.0
3,336,619	-		Rru_A2893	0.56	-0.0
3,336,959	+				-0.0
3,336,959	+				-0.0
3,336,959	+				-0.0
3,336,959	+				-0.0
3,336,959	+				+0.6
3,336,959	+				+1.3
3,336,960	-				-0.0
3,336,960	-				+1.0
3,336,960	-				+0.6
3,336,960	-				-0.0
3,337,049	-				-1.0
3,337,627	+		Rru_A2894	0.70	-1.0
3,337,627	+		Rru_A2894	0.70	-0.0
3,337,627	+		Rru_A2894	0.70	-0.5
3,337,627	+		Rru_A2894	0.70	-1.1
3,337,627	+		Rru_A2894	0.70	+0.2
3,337,628	-		Rru_A2894	0.70	-0.0
3,337,628	-		Rru_A2894	0.70	-0.0
3,337,811	+				-0.0
3,337,825	+				-0.7
3,337,825	+				-0.0
3,337,826	-				-0.0
3,337,998	+				-0.0
3,337,998	+				-0.0
3,337,998	+				-0.0
3,337,998	+				-1.0
3,337,998	+				-0.1
3,337,998	+				-0.0
3,337,999	-				-0.0
3,337,999	-				-0.0
3,338,040	+		Rru_A2895	0.10	-0.0
3,338,040	+		Rru_A2895	0.10	-0.0
3,338,041	-		Rru_A2895	0.11	-0.0
3,338,041	-		Rru_A2895	0.11	+0.6
3,338,041	-		Rru_A2895	0.11	-0.0
3,338,211	+		Rru_A2895	0.29	-0.0
3,338,211	+		Rru_A2895	0.29	-1.0
3,338,212	-		Rru_A2895	0.29	+1.0
3,338,244	+		Rru_A2895	0.32	-0.0
3,338,245	-		Rru_A2895	0.32	+0.6
3,338,346	+		Rru_A2895	0.43	-0.0
3,338,346	+		Rru_A2895	0.43	-1.5
3,338,347	-		Rru_A2895	0.43	-0.2
3,338,424	+		Rru_A2895	0.52	+1.2
3,338,424	+		Rru_A2895	0.52	-1.6
3,338,425	-		Rru_A2895	0.52	-0.0
3,338,425	-		Rru_A2895	0.52	-0.1
3,338,425	-		Rru_A2895	0.52	-0.0
3,338,478	+		Rru_A2895	0.57	-0.0
3,338,478	+		Rru_A2895	0.57	-0.0
3,338,478	+		Rru_A2895	0.57	-0.1
3,338,478	+		Rru_A2895	0.57	-0.0
3,338,478	+		Rru_A2895	0.57	-0.2
3,338,478	+		Rru_A2895	0.57	-0.8
3,338,479	-		Rru_A2895	0.57	-0.0
3,338,479	-		Rru_A2895	0.57	-0.0
3,338,623	+		Rru_A2895	0.73	-0.0
3,338,623	+		Rru_A2895	0.73	+1.8
3,338,647	-		Rru_A2895	0.75	-1.0
3,338,647	-		Rru_A2895	0.75	+0.6