Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2887

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,331,282	+		Rru_A2886	0.78	-2.0
3,331,283	-		Rru_A2886	0.78	-0.0
3,331,283	-		Rru_A2886	0.78	-2.6
3,331,283	-		Rru_A2886	0.78	-0.0
3,331,286	+		Rru_A2886	0.78	-2.5
3,331,286	+		Rru_A2886	0.78	-0.0
3,331,286	+		Rru_A2886	0.78	-3.3
3,331,286	+		Rru_A2886	0.78	-3.5
3,331,286	+		Rru_A2886	0.78	-2.3
3,331,286	+		Rru_A2886	0.78	-0.0
3,331,286	+		Rru_A2886	0.78	-2.4
3,331,286	+		Rru_A2886	0.78	-2.2
3,331,286	+		Rru_A2886	0.78	-4.6
3,331,286	+		Rru_A2886	0.78	-2.0
3,331,287	-		Rru_A2886	0.78	-1.3
3,331,287	-		Rru_A2886	0.78	-3.5
3,331,484	-		Rru_A2886	0.84	-2.6
3,331,798	+				-3.9
3,331,892	+				-2.3
3,331,893	-				-2.8
3,331,984	+				+1.3
3,332,223	+		Rru_A2887	0.30	-0.0
3,332,391	+		Rru_A2887	0.65	-0.0
3,332,391	+		Rru_A2887	0.65	+0.4
3,332,392	-		Rru_A2887	0.65	-0.0
3,332,526	+				-0.0
3,332,636	+				-0.0
3,332,697	+				+0.5
3,332,697	+				-0.0
3,332,699	+				-0.0
3,332,699	+				-0.0
3,332,699	+				+0.2
3,332,699	+				+0.3
3,332,699	+				-0.5
3,332,700	-				-0.1
3,332,712	+				+1.0
3,332,712	+				-0.0
3,332,713	-				-0.0
3,332,713	-				+0.6
3,332,794	-				-0.1
3,332,873	-		Rru_A2888	0.14	-0.0
3,332,909	-		Rru_A2888	0.19	-0.0
3,332,985	-		Rru_A2888	0.30	+0.3
3,332,985	-		Rru_A2888	0.30	-1.0
3,333,156	-		Rru_A2888	0.55	-0.0
3,333,425	-				-0.4
3,333,425	-				-0.0
3,333,433	+				-1.0
3,333,433	+				-0.0
3,333,433	+				-0.0
3,333,433	+				-3.0
3,333,434	-				-0.0
3,333,434	-				-1.0
3,333,434	-				+0.1
3,333,465	+				+0.6
3,333,466	-				+0.3