Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2863

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,295,631	+		Rru_A2861	0.88	+0.8
3,295,631	+		Rru_A2861	0.88	-0.9
3,295,632	-		Rru_A2861	0.88	+0.5
3,295,729	+				-0.0
3,295,730	-				-0.3
3,295,816	-		Rru_A2862	0.15	-1.0
3,295,886	+		Rru_A2862	0.23	+0.4
3,295,887	-		Rru_A2862	0.23	+0.5
3,295,946	+		Rru_A2862	0.31	-0.1
3,295,946	+		Rru_A2862	0.31	-0.3
3,295,946	+		Rru_A2862	0.31	+0.3
3,295,947	-		Rru_A2862	0.31	-0.0
3,295,947	-		Rru_A2862	0.31	-0.0
3,296,026	+		Rru_A2862	0.40	+0.1
3,296,027	-		Rru_A2862	0.40	-0.0
3,296,336	+		Rru_A2862	0.78	-0.5
3,296,336	+		Rru_A2862	0.78	+1.0
3,296,336	+		Rru_A2862	0.78	+1.6
3,296,336	+		Rru_A2862	0.78	+0.7
3,296,337	-		Rru_A2862	0.78	+0.6
3,296,337	-		Rru_A2862	0.78	+0.1
3,296,337	-		Rru_A2862	0.78	+0.3
3,296,337	-		Rru_A2862	0.78	-0.0
3,296,419	+		Rru_A2862	0.88	+0.6
3,296,419	+		Rru_A2862	0.88	-0.1
3,296,419	+		Rru_A2862	0.88	-0.0
3,296,419	+		Rru_A2862	0.88	+1.1
3,296,420	-		Rru_A2862	0.89	-0.0
3,296,420	-		Rru_A2862	0.89	+0.9
3,296,420	-		Rru_A2862	0.89	-0.0
3,296,420	-		Rru_A2862	0.89	+0.3
3,296,510	+				-0.0
3,296,511	-				-0.0
3,296,511	-				-0.0
3,296,617	-				+0.3
3,296,721	+		Rru_A2863	0.16	-0.0
3,296,721	+		Rru_A2863	0.16	-1.0
3,296,721	+		Rru_A2863	0.16	-0.1
3,296,722	-		Rru_A2863	0.16	-0.0
3,297,011	-		Rru_A2863	0.61	+0.5
3,297,011	-		Rru_A2863	0.61	+0.2
3,297,117	+		Rru_A2863	0.77	-0.0
3,297,117	+		Rru_A2863	0.77	+1.0
3,297,117	+		Rru_A2863	0.77	-0.4
3,297,118	-		Rru_A2863	0.77	+0.6
3,297,144	+		Rru_A2863	0.81	-0.0
3,297,144	+		Rru_A2863	0.81	+1.0
3,297,144	+		Rru_A2863	0.81	-0.4
3,297,144	+		Rru_A2863	0.81	+0.1
3,297,145	-		Rru_A2863	0.81	-0.0
3,297,279	+				-1.0
3,297,279	+				+0.5
3,297,279	+				-0.7
3,297,280	-				+0.3
3,297,450	+				+1.5
3,297,450	+				+1.2
3,297,450	+				+1.1
3,297,451	-				-0.0
3,297,451	-				+0.6
3,297,475	-				-1.0
3,297,584	+		Rru_A2864	0.19	+1.0
3,297,584	+		Rru_A2864	0.19	-0.0
3,297,584	+		Rru_A2864	0.19	-0.0
3,297,626	+		Rru_A2864	0.24	+0.6
3,297,626	+		Rru_A2864	0.24	-0.0
3,297,627	-		Rru_A2864	0.24	-0.0
3,297,627	-		Rru_A2864	0.24	-0.0
3,297,936	+		Rru_A2864	0.62	+1.2
3,297,936	+		Rru_A2864	0.62	-1.0
3,297,936	+		Rru_A2864	0.62	+1.1
3,297,936	+		Rru_A2864	0.62	+0.4
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	+0.8
3,297,936	+		Rru_A2864	0.62	+0.5
3,297,936	+		Rru_A2864	0.62	-1.0
3,297,936	+		Rru_A2864	0.62	-0.0
3,297,936	+		Rru_A2864	0.62	-2.0
3,297,936	+		Rru_A2864	0.62	+1.8
3,297,937	-		Rru_A2864	0.62	-0.7
3,297,937	-		Rru_A2864	0.62	+0.9
3,297,937	-		Rru_A2864	0.62	-1.0
3,297,937	-		Rru_A2864	0.62	+0.1
3,297,937	-		Rru_A2864	0.62	-0.0
3,297,941	+		Rru_A2864	0.63	-0.0
3,297,942	-		Rru_A2864	0.63	-0.9
3,298,189	-				-0.6
3,298,199	+				-0.0
3,298,199	+				+1.4
3,298,199	+				-0.0
3,298,199	+				-0.0
3,298,200	-				-0.0