Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2857

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,290,063	+		Rru_A2856	0.47	+1.5
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	+0.6
3,290,064	-		Rru_A2856	0.48	-0.1
3,290,064	-		Rru_A2856	0.48	-0.0
3,290,064	-		Rru_A2856	0.48	+0.7
3,290,172	-		Rru_A2856	0.82	+0.8
3,290,172	-		Rru_A2856	0.82	+0.1
3,290,172	-		Rru_A2856	0.82	-0.0
3,290,172	-		Rru_A2856	0.82	+0.3
3,290,172	-		Rru_A2856	0.82	+0.2
3,290,216	+				+0.4
3,290,217	-				-0.0
3,290,217	-				-0.1
3,290,217	-				+0.1
3,290,219	+				-0.1
3,290,220	-				-0.3
3,290,220	-				-0.0
3,290,220	-				-1.0
3,290,220	-				+0.8
3,290,220	-				+1.2
3,290,275	+				+0.1
3,290,275	+				-0.6
3,290,322	-		Rru_A2857	0.19	+0.2
3,290,322	-		Rru_A2857	0.19	-0.0
3,290,322	-		Rru_A2857	0.19	-0.1
3,290,322	-		Rru_A2857	0.19	-0.3
3,290,346	+		Rru_A2857	0.24	-0.2
3,290,397	+		Rru_A2857	0.35	-1.1
3,290,397	+		Rru_A2857	0.35	+0.4
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,433	+		Rru_A2857	0.43	-0.0
3,290,495	+		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-1.0
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-2.3
3,290,496	-		Rru_A2857	0.57	-2.3
3,290,676	+				-0.0
3,290,715	+				-2.2
3,290,784	+				-0.0
3,290,784	+				+0.3
3,290,822	+				+0.6
3,290,822	+				-0.1
3,290,855	+				+0.8
3,290,855	+				+0.5
3,290,855	+				-2.0
3,290,855	+				+0.5
3,290,855	+				+0.9
3,290,855	+				+1.0
3,290,855	+				+1.1
3,290,856	-				-3.3
3,290,856	-				-1.2
3,290,856	-				-0.4
3,290,936	+				-2.1
3,291,138	+		Rru_A2858	0.23	-0.0
3,291,138	+		Rru_A2858	0.23	+1.0
3,291,219	-		Rru_A2858	0.33	-0.0
3,291,235	-		Rru_A2858	0.34	+1.2
3,291,407	+		Rru_A2858	0.54	-2.0
3,291,407	+		Rru_A2858	0.54	-1.2
3,291,407	+		Rru_A2858	0.54	-0.0
3,291,407	+		Rru_A2858	0.54	+0.7
3,291,408	-		Rru_A2858	0.54	+0.4
3,291,408	-		Rru_A2858	0.54	-1.0
3,291,408	-		Rru_A2858	0.54	+0.5
3,291,411	+		Rru_A2858	0.55	-0.0
3,291,412	-		Rru_A2858	0.55	-0.0
3,291,412	-		Rru_A2858	0.55	+0.5
3,291,412	-		Rru_A2858	0.55	+0.1
3,291,501	+		Rru_A2858	0.65	+0.4
3,291,502	-		Rru_A2858	0.65	+0.2
3,291,502	-		Rru_A2858	0.65	+0.6
3,291,640	-		Rru_A2858	0.81	-0.4