Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2855

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,286,159	-		Rru_A2854	0.50	-0.4
3,286,179	+		Rru_A2854	0.51	-1.0
3,286,179	+		Rru_A2854	0.51	-0.0
3,286,179	+		Rru_A2854	0.51	-0.0
3,286,179	+		Rru_A2854	0.51	+0.6
3,286,180	-		Rru_A2854	0.51	-0.0
3,286,180	-		Rru_A2854	0.51	-0.0
3,286,180	-		Rru_A2854	0.51	-0.0
3,286,180	-		Rru_A2854	0.51	-0.3
3,286,180	-		Rru_A2854	0.51	+0.4
3,287,290	-				-0.0
3,287,396	-		Rru_A2855	0.13	-0.0
3,287,396	-		Rru_A2855	0.13	-0.0
3,287,436	+		Rru_A2855	0.14	-0.3
3,287,438	+		Rru_A2855	0.14	-0.0
3,287,438	+		Rru_A2855	0.14	+0.6
3,287,438	+		Rru_A2855	0.14	-0.0
3,287,439	-		Rru_A2855	0.14	-1.0
3,287,439	-		Rru_A2855	0.14	+0.2
3,287,439	-		Rru_A2855	0.14	-1.0
3,287,439	-		Rru_A2855	0.14	+0.5
3,287,474	+		Rru_A2855	0.15	+0.4
3,287,507	+		Rru_A2855	0.17	-0.0
3,287,516	+		Rru_A2855	0.17	-0.2
3,287,516	+		Rru_A2855	0.17	-0.0
3,287,516	+		Rru_A2855	0.17	-0.0
3,287,516	+		Rru_A2855	0.17	-0.0
3,287,516	+		Rru_A2855	0.17	-0.0
3,287,517	-		Rru_A2855	0.17	-1.6
3,287,517	-		Rru_A2855	0.17	-0.0
3,287,517	-		Rru_A2855	0.17	+1.2
3,287,517	-		Rru_A2855	0.17	+0.2
3,287,517	-		Rru_A2855	0.17	-0.0
3,287,517	-		Rru_A2855	0.17	+0.3
3,287,517	-		Rru_A2855	0.17	+0.6
3,287,682	+		Rru_A2855	0.23	-0.0
3,287,682	+		Rru_A2855	0.23	-0.0
3,287,682	+		Rru_A2855	0.23	+0.5
3,287,683	-		Rru_A2855	0.23	-0.0
3,287,683	-		Rru_A2855	0.23	+0.7
3,287,685	+		Rru_A2855	0.23	+1.0
3,287,685	+		Rru_A2855	0.23	-0.1
3,287,685	+		Rru_A2855	0.23	-0.0
3,287,685	+		Rru_A2855	0.23	-0.0
3,287,884	-		Rru_A2855	0.30	-1.0
3,287,900	+		Rru_A2855	0.31	+0.1
3,287,900	+		Rru_A2855	0.31	+1.4
3,287,900	+		Rru_A2855	0.31	-0.0
3,287,901	-		Rru_A2855	0.31	+0.9
3,287,901	-		Rru_A2855	0.31	+1.1
3,288,107	+		Rru_A2855	0.38	+1.0
3,288,107	+		Rru_A2855	0.38	+0.4
3,288,107	+		Rru_A2855	0.38	+0.6
3,288,107	+		Rru_A2855	0.38	-0.0
3,288,107	+		Rru_A2855	0.38	-0.0
3,288,108	-		Rru_A2855	0.38	-0.3
3,288,108	-		Rru_A2855	0.38	+2.1
3,288,108	-		Rru_A2855	0.38	-0.0
3,288,164	+		Rru_A2855	0.40	+0.6
3,288,200	+		Rru_A2855	0.41	-0.0
3,288,201	-		Rru_A2855	0.41	+0.8
3,288,278	+		Rru_A2855	0.44	-0.0
3,288,278	+		Rru_A2855	0.44	+1.5
3,288,278	+		Rru_A2855	0.44	-0.0
3,288,278	+		Rru_A2855	0.44	-0.0
3,288,279	-		Rru_A2855	0.44	-0.0
3,288,279	-		Rru_A2855	0.44	+0.2
3,288,338	+		Rru_A2855	0.46	+0.5
3,288,338	+		Rru_A2855	0.46	+0.5
3,288,338	+		Rru_A2855	0.46	+0.5
3,288,339	-		Rru_A2855	0.46	+1.2
3,288,339	-		Rru_A2855	0.46	-0.0
3,288,339	-		Rru_A2855	0.46	-0.2
3,288,339	-		Rru_A2855	0.46	-0.2
3,288,339	-		Rru_A2855	0.46	+0.6
3,288,339	-		Rru_A2855	0.46	-0.0
3,288,339	-		Rru_A2855	0.46	+1.1
3,288,365	+		Rru_A2855	0.47	-1.2
3,288,365	+		Rru_A2855	0.47	-0.0
3,288,366	-		Rru_A2855	0.47	+1.1
3,288,366	-		Rru_A2855	0.47	-0.0
3,288,481	+		Rru_A2855	0.51	+0.0
3,288,481	+		Rru_A2855	0.51	-0.0
3,288,481	+		Rru_A2855	0.51	+2.0
3,288,481	+		Rru_A2855	0.51	-0.0
3,288,481	+		Rru_A2855	0.51	-0.0
3,288,481	+		Rru_A2855	0.51	-1.0
3,288,481	+		Rru_A2855	0.51	+1.0
3,288,481	+		Rru_A2855	0.51	-0.3
3,288,481	+		Rru_A2855	0.51	-0.1
3,288,482	-		Rru_A2855	0.51	-0.0
3,288,482	-		Rru_A2855	0.51	+0.5
3,288,482	-		Rru_A2855	0.51	+0.7
3,288,482	-		Rru_A2855	0.51	-0.0
3,288,482	-		Rru_A2855	0.51	-0.0
3,288,482	-		Rru_A2855	0.51	-0.0
3,288,482	-		Rru_A2855	0.51	-0.0
3,288,484	-		Rru_A2855	0.51	-0.7
3,288,638	+		Rru_A2855	0.57	+0.4
3,288,638	+		Rru_A2855	0.57	+0.5
3,288,638	+		Rru_A2855	0.57	-0.0
3,288,656	+		Rru_A2855	0.57	-0.0
3,288,656	+		Rru_A2855	0.57	-0.1
3,288,657	-		Rru_A2855	0.57	-0.0
3,288,657	-		Rru_A2855	0.57	-0.0
3,288,657	-		Rru_A2855	0.57	-0.0
3,288,784	-		Rru_A2855	0.62	+0.3
3,288,784	-		Rru_A2855	0.62	-0.0
3,288,966	+		Rru_A2855	0.68	+0.7
3,289,127	+		Rru_A2855	0.74	-1.6
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,127	+		Rru_A2855	0.74	+1.0
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	+0.6
3,290,063	+		Rru_A2856	0.47	+1.5
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	+0.6
3,290,064	-		Rru_A2856	0.48	-0.1
3,290,064	-		Rru_A2856	0.48	-0.0
3,290,064	-		Rru_A2856	0.48	+0.7
3,290,172	-		Rru_A2856	0.82	+0.8
3,290,172	-		Rru_A2856	0.82	+0.1
3,290,172	-		Rru_A2856	0.82	-0.0
3,290,172	-		Rru_A2856	0.82	+0.3
3,290,172	-		Rru_A2856	0.82	+0.2
3,290,216	+				+0.4
3,290,217	-				-0.0
3,290,217	-				-0.1
3,290,217	-				+0.1
3,290,219	+				-0.1
3,290,220	-				-0.3
3,290,220	-				-0.0
3,290,220	-				-1.0
3,290,220	-				+0.8
3,290,220	-				+1.2
3,290,275	+				+0.1
3,290,275	+				-0.6
3,290,322	-		Rru_A2857	0.19	+0.2
3,290,322	-		Rru_A2857	0.19	-0.0
3,290,322	-		Rru_A2857	0.19	-0.1
3,290,322	-		Rru_A2857	0.19	-0.3
3,290,346	+		Rru_A2857	0.24	-0.2
3,290,397	+		Rru_A2857	0.35	-1.1
3,290,397	+		Rru_A2857	0.35	+0.4
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,433	+		Rru_A2857	0.43	-0.0
3,290,495	+		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-1.0
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-2.3
3,290,496	-		Rru_A2857	0.57	-2.3
3,290,676	+				-0.0
3,290,715	+				-2.2
3,290,784	+				-0.0
3,290,784	+				+0.3
3,290,822	+				+0.6
3,290,822	+				-0.1