Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2841

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,271,924	-		Rru_A2840	0.47	-0.9
3,271,924	-		Rru_A2840	0.47	-0.0
3,271,925	+		Rru_A2840	0.47	+0.0
3,271,925	+		Rru_A2840	0.47	+0.2
3,271,925	+		Rru_A2840	0.47	+0.5
3,271,994	+		Rru_A2840	0.53	-0.0
3,271,994	+		Rru_A2840	0.53	+0.7
3,271,994	+		Rru_A2840	0.53	+1.0
3,271,994	+		Rru_A2840	0.53	-1.0
3,271,995	-		Rru_A2840	0.53	-0.0
3,271,995	-		Rru_A2840	0.53	+0.8
3,271,995	-		Rru_A2840	0.53	+0.7
3,272,027	+		Rru_A2840	0.56	-0.0
3,272,105	+		Rru_A2840	0.63	-0.3
3,272,105	+		Rru_A2840	0.63	-0.0
3,272,105	+		Rru_A2840	0.63	+0.9
3,272,222	+		Rru_A2840	0.73	+0.1
3,272,223	-		Rru_A2840	0.73	+0.2
3,272,223	-		Rru_A2840	0.73	+1.0
3,272,223	-		Rru_A2840	0.73	+0.9
3,272,508	+				+0.6
3,272,509	-				-0.0
3,272,539	+				-0.0
3,272,540	-				+0.5
3,272,540	-				+1.7
3,272,548	-				-0.0
3,272,669	+		Rru_A2841	0.16	+0.1
3,272,669	+		Rru_A2841	0.16	-1.0
3,272,669	+		Rru_A2841	0.16	+1.2
3,272,670	-		Rru_A2841	0.16	+0.7
3,272,670	-		Rru_A2841	0.16	+0.2
3,272,670	-		Rru_A2841	0.16	-1.6
3,272,670	-		Rru_A2841	0.16	-0.0
3,272,730	+		Rru_A2841	0.26	-2.0
3,272,730	+		Rru_A2841	0.26	+0.5
3,272,730	+		Rru_A2841	0.26	+1.0
3,272,731	-		Rru_A2841	0.26	-0.0
3,272,813	+		Rru_A2841	0.40	-0.3
3,272,813	+		Rru_A2841	0.40	-0.7
3,272,813	+		Rru_A2841	0.40	-0.0
3,272,813	+		Rru_A2841	0.40	+0.1
3,272,814	-		Rru_A2841	0.40	+0.2
3,272,814	-		Rru_A2841	0.40	-0.0
3,272,867	+		Rru_A2841	0.49	-0.0
3,272,867	+		Rru_A2841	0.49	+0.4
3,272,868	-		Rru_A2841	0.50	-0.0
3,272,868	-		Rru_A2841	0.50	+0.9
3,272,996	+		Rru_A2841	0.71	+0.3
3,272,996	+		Rru_A2841	0.71	-0.0
3,272,996	+		Rru_A2841	0.71	+0.0
3,272,997	-		Rru_A2841	0.71	+0.6
3,273,110	+				-0.0
3,273,111	-				-1.4
3,273,111	-				-0.0
3,273,227	+				-0.5
3,273,227	+				+0.2
3,273,227	+				-0.5
3,273,227	+				-0.0
3,273,227	+				-0.3
3,273,227	+				-0.0
3,273,227	+				-1.0
3,273,228	-				+0.6
3,273,228	-				-0.2
3,273,228	-				+0.4
3,273,241	+				-1.0
3,273,242	-				-0.0
3,273,242	-				+0.6
3,273,407	-				+2.0
3,273,516	+				+0.4
3,273,516	+				-0.3
3,273,516	+				+0.2
3,273,516	+				-0.0
3,273,517	-				-1.0
3,273,517	-				+0.6
3,273,517	-				+1.1
3,273,520	+				-0.0
3,273,520	+				-0.7
3,273,520	+				-0.0
3,273,520	+				-0.0
3,273,521	-				+1.3
3,273,585	-		Rru_A2842	0.11	-0.0
3,273,682	-		Rru_A2842	0.25	+0.3
3,273,682	-		Rru_A2842	0.25	+0.3
3,273,682	-		Rru_A2842	0.25	+0.0
3,273,703	-		Rru_A2842	0.27	+0.5
3,273,774	+		Rru_A2842	0.37	-1.0
3,273,774	+		Rru_A2842	0.37	-0.0
3,273,775	-		Rru_A2842	0.37	+0.6
3,273,807	+		Rru_A2842	0.41	-0.0
3,273,807	+		Rru_A2842	0.41	+0.9
3,273,807	+		Rru_A2842	0.41	+0.5
3,273,808	-		Rru_A2842	0.42	-0.0
3,273,808	-		Rru_A2842	0.42	-0.0
3,273,912	-		Rru_A2842	0.56	+0.7
3,274,158	+		Rru_A2842	0.89	+1.0
3,274,159	-		Rru_A2842	0.89	-0.0
3,274,159	-		Rru_A2842	0.89	+1.0