Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2821

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,255,009	+		Rru_A2820	0.66	-0.0
3,255,009	+		Rru_A2820	0.66	+0.4
3,255,009	+		Rru_A2820	0.66	-0.4
3,255,010	-		Rru_A2820	0.66	-0.0
3,255,010	-		Rru_A2820	0.66	-1.5
3,255,010	-		Rru_A2820	0.66	-1.6
3,255,236	-		Rru_A2820	0.75	-0.3
3,255,257	-		Rru_A2820	0.76	+0.3
3,255,257	-		Rru_A2820	0.76	+0.5
3,255,402	-		Rru_A2820	0.82	-1.3
3,255,404	-		Rru_A2820	0.82	-0.7
3,255,404	-		Rru_A2820	0.82	-0.0
3,255,857	+				-1.5
3,255,857	+				-0.0
3,255,857	+				-0.0
3,255,857	+				+0.2
3,255,858	-				+1.0
3,255,858	-				-0.0
3,255,858	-				+0.7
3,255,858	-				-0.0
3,255,890	+				-0.8
3,255,890	+				-0.0
3,255,891	-				+0.8
3,255,917	+				+0.0
3,255,917	+				+0.3
3,255,917	+				-0.0
3,255,918	-				-0.0
3,255,918	-				+0.2
3,255,918	-				+0.6
3,256,086	+		Rru_A2821	0.21	-1.0
3,256,091	+		Rru_A2821	0.22	-0.0
3,256,091	+		Rru_A2821	0.22	-0.0
3,256,091	+		Rru_A2821	0.22	-0.1
3,256,091	+		Rru_A2821	0.22	-0.0
3,256,233	+		Rru_A2821	0.35	+0.4
3,256,233	+		Rru_A2821	0.35	-0.0
3,256,233	+		Rru_A2821	0.35	-0.0
3,256,233	+		Rru_A2821	0.35	-0.0
3,256,233	+		Rru_A2821	0.35	-0.3
3,256,234	-		Rru_A2821	0.35	+0.7
3,256,234	-		Rru_A2821	0.35	-0.2
3,256,234	-		Rru_A2821	0.35	-0.0
3,256,234	-		Rru_A2821	0.35	-0.5
3,256,234	-		Rru_A2821	0.35	-0.0
3,256,234	-		Rru_A2821	0.35	+0.1
3,256,234	-		Rru_A2821	0.35	-0.0
3,256,234	-		Rru_A2821	0.35	+0.5
3,256,234	-		Rru_A2821	0.35	-0.7
3,256,286	+		Rru_A2821	0.40	+0.1
3,256,286	+		Rru_A2821	0.40	-1.0
3,256,287	-		Rru_A2821	0.40	+0.5
3,256,287	-		Rru_A2821	0.40	-0.0
3,256,392	+		Rru_A2821	0.50	-0.0
3,256,392	+		Rru_A2821	0.50	-0.0
3,256,565	-		Rru_A2821	0.66	+1.3
3,256,662	+		Rru_A2821	0.75	+0.1
3,256,979	+				-0.0
3,256,980	-				-0.2
3,257,041	-				-0.3
3,257,175	+		Rru_A2822	0.25	-1.0
3,257,175	+		Rru_A2822	0.25	-0.0
3,257,175	+		Rru_A2822	0.25	+0.8
3,257,175	+		Rru_A2822	0.25	-0.0
3,257,176	-		Rru_A2822	0.25	-0.0
3,257,176	-		Rru_A2822	0.25	+0.3
3,257,176	-		Rru_A2822	0.25	-0.6
3,257,176	-		Rru_A2822	0.25	+0.5
3,257,176	-		Rru_A2822	0.25	-0.4
3,257,251	+		Rru_A2822	0.35	+0.5
3,257,252	-		Rru_A2822	0.35	+0.2
3,257,252	-		Rru_A2822	0.35	+0.6
3,257,293	-		Rru_A2822	0.40	-0.0
3,257,293	-		Rru_A2822	0.40	+0.6
3,257,452	+		Rru_A2822	0.61	-1.0
3,257,452	+		Rru_A2822	0.61	+0.3
3,257,453	-		Rru_A2822	0.61	-1.0
3,257,453	-		Rru_A2822	0.61	-0.0
3,257,608	+		Rru_A2822	0.81	+0.8
3,257,649	+		Rru_A2822	0.87	-0.0
3,257,649	+		Rru_A2822	0.87	+1.8
3,257,650	-		Rru_A2822	0.87	-0.1
3,257,650	-		Rru_A2822	0.87	-0.0
3,257,650	-		Rru_A2822	0.87	-0.3
3,257,764	+				+0.5
3,257,765	-				-0.3
3,257,765	-				-0.1
3,257,830	-				+0.6