Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2808

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,239,282	+		Rru_A2807	0.41	+1.3
3,239,294	+		Rru_A2807	0.42	+0.3
3,239,295	-		Rru_A2807	0.42	-0.0
3,239,295	-		Rru_A2807	0.42	-0.6
3,239,526	+		Rru_A2807	0.58	-0.0
3,239,527	-		Rru_A2807	0.58	+1.0
3,239,527	-		Rru_A2807	0.58	-0.0
3,240,134	+				+1.2
3,240,134	+				+0.3
3,240,134	+				+0.9
3,240,247	-				-1.0
3,240,247	-				-0.0
3,240,261	+				+1.0
3,240,261	+				+2.0
3,240,262	-				-2.4
3,240,262	-				+0.8
3,240,325	+		Rru_A2808	0.15	+0.5
3,240,325	+		Rru_A2808	0.15	+1.1
3,240,493	-		Rru_A2808	0.47	-0.0
3,240,508	-		Rru_A2808	0.50	+0.5
3,240,508	-		Rru_A2808	0.50	-0.0
3,240,736	+				-0.0
3,240,736	+				+0.8
3,240,736	+				-0.0
3,240,737	-				-1.6
3,240,737	-				-0.0
3,240,816	+				-0.5
3,240,817	-				+0.2
3,240,825	+				-0.0
3,240,825	+				+1.5
3,240,826	-				+1.5
3,240,826	-				-0.0
3,240,826	-				+1.5
3,240,836	-				+2.5
3,240,844	-				+0.7
3,240,844	-				+1.8
3,241,039	-				+2.4
3,241,141	+		Rru_A2809	0.10	+0.4
3,241,155	+		Rru_A2809	0.11	-0.0
3,241,155	+		Rru_A2809	0.11	-0.5
3,241,156	-		Rru_A2809	0.11	-0.2
3,241,156	-		Rru_A2809	0.11	+0.4
3,241,156	-		Rru_A2809	0.11	-1.0
3,241,156	-		Rru_A2809	0.11	+1.0
3,241,227	+		Rru_A2809	0.15	+0.8
3,241,228	-		Rru_A2809	0.15	-0.0
3,241,245	-		Rru_A2809	0.15	-0.0
3,241,317	+		Rru_A2809	0.19	+0.5
3,241,317	+		Rru_A2809	0.19	+0.7
3,241,423	+		Rru_A2809	0.24	+0.5
3,241,424	-		Rru_A2809	0.25	-0.0
3,241,425	+		Rru_A2809	0.25	-0.4
3,241,425	+		Rru_A2809	0.25	+1.0
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,426	-		Rru_A2809	0.25	-0.5
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,426	-		Rru_A2809	0.25	-0.0
3,241,467	+		Rru_A2809	0.27	-0.0
3,241,468	-		Rru_A2809	0.27	-0.0
3,241,653	+		Rru_A2809	0.36	+1.5
3,241,653	+		Rru_A2809	0.36	+1.2
3,241,653	+		Rru_A2809	0.36	-0.0
3,241,653	+		Rru_A2809	0.36	+0.4
3,241,653	+		Rru_A2809	0.36	+0.8
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,654	-		Rru_A2809	0.36	+0.9
3,241,654	-		Rru_A2809	0.36	-0.0
3,241,719	+		Rru_A2809	0.39	-0.2
3,241,720	-		Rru_A2809	0.39	-0.0
3,241,720	-		Rru_A2809	0.39	-0.0
3,241,720	-		Rru_A2809	0.39	-0.0
3,241,720	-		Rru_A2809	0.39	-1.0
3,241,720	-		Rru_A2809	0.39	+1.0