Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2796

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,229,153	+				+0.7
3,229,422	-		Rru_A2795	0.60	+1.0
3,229,499	-		Rru_A2795	0.80	+0.5
3,229,572	+				+0.3
3,229,572	+				+0.1
3,229,572	+				-0.0
3,229,572	+				-0.0
3,229,573	-				+0.6
3,229,573	-				-0.5
3,229,573	-				+1.0
3,229,573	-				+1.2
3,229,574	+				+0.2
3,229,574	+				+1.0
3,229,574	+				+0.1
3,229,574	+				+0.5
3,229,574	+				+0.2
3,229,574	+				-0.0
3,229,575	-				-0.0
3,229,575	-				+0.0
3,229,575	-				+0.6
3,229,575	-				+0.3
3,229,626	+				+0.2
3,229,627	-				+0.7
3,229,706	+				+0.2
3,229,707	-				+0.5
3,229,707	-				+0.4
3,230,363	+		Rru_A2796	0.31	-0.0
3,230,363	+		Rru_A2796	0.31	+0.3
3,230,363	+		Rru_A2796	0.31	-0.0
3,230,364	-		Rru_A2796	0.31	+0.7
3,230,364	-		Rru_A2796	0.31	-1.0
3,230,364	-		Rru_A2796	0.31	-0.0
3,230,364	-		Rru_A2796	0.31	+1.0
3,230,404	-		Rru_A2796	0.32	-0.0
3,230,412	-		Rru_A2796	0.33	+0.7
3,230,448	-		Rru_A2796	0.34	+1.2
3,230,535	+		Rru_A2796	0.38	+0.8
3,230,536	-		Rru_A2796	0.39	-0.0
3,230,536	-		Rru_A2796	0.39	+0.5
3,230,667	+		Rru_A2796	0.45	+0.7
3,230,922	+		Rru_A2796	0.56	+0.0
3,230,922	+		Rru_A2796	0.56	-0.0
3,230,922	+		Rru_A2796	0.56	-0.0
3,230,923	-		Rru_A2796	0.56	-1.6
3,230,923	-		Rru_A2796	0.56	-0.0
3,230,924	+		Rru_A2796	0.57	+1.6
3,230,924	+		Rru_A2796	0.57	+0.6
3,230,925	-		Rru_A2796	0.57	-0.0
3,230,925	-		Rru_A2796	0.57	-0.0
3,230,925	-		Rru_A2796	0.57	+0.8
3,230,925	-		Rru_A2796	0.57	-0.8
3,230,925	-		Rru_A2796	0.57	-0.1
3,231,149	+		Rru_A2796	0.67	+0.1
3,231,149	+		Rru_A2796	0.67	+0.4
3,231,149	+		Rru_A2796	0.67	-0.0
3,231,149	+		Rru_A2796	0.67	-0.0
3,231,149	+		Rru_A2796	0.67	-0.4
3,231,350	+		Rru_A2796	0.76	-0.0
3,231,350	+		Rru_A2796	0.76	+1.1
3,231,350	+		Rru_A2796	0.76	+0.4
3,231,350	+		Rru_A2796	0.76	-0.0
3,231,350	+		Rru_A2796	0.76	+0.8
3,231,351	-		Rru_A2796	0.76	-0.1
3,231,351	-		Rru_A2796	0.76	-0.0
3,231,351	-		Rru_A2796	0.76	-0.0
3,231,351	-		Rru_A2796	0.76	-0.0
3,231,363	+		Rru_A2796	0.77	+0.5
3,231,381	+		Rru_A2796	0.78	+0.5
3,231,381	+		Rru_A2796	0.78	+1.3
3,231,381	+		Rru_A2796	0.78	-0.3
3,231,382	-		Rru_A2796	0.78	+0.7
3,231,382	-		Rru_A2796	0.78	-0.0
3,231,382	-		Rru_A2796	0.78	+0.5
3,231,395	+		Rru_A2796	0.78	-0.0
3,231,396	-		Rru_A2796	0.78	+0.5
3,231,396	-		Rru_A2796	0.78	+0.6
3,231,396	-		Rru_A2796	0.78	+0.8
3,231,767	+				-0.0
3,231,767	+				+0.5
3,231,767	+				-0.0
3,231,768	-				-0.0
3,231,779	+				-0.0
3,231,819	+				-0.5
3,231,821	+				-0.4
3,231,821	+				-0.0
3,231,822	-				+0.7
3,231,822	-				-0.0
3,231,890	+				-0.0
3,231,890	+				+0.9
3,231,891	-				+0.7
3,231,891	-				+0.9
3,232,237	+		Rru_A2797	0.52	+0.5
3,232,265	-		Rru_A2797	0.56	+0.3
3,232,321	+		Rru_A2797	0.65	-1.0
3,232,327	+		Rru_A2797	0.66	+0.3
3,232,327	+		Rru_A2797	0.66	+0.2
3,232,327	+		Rru_A2797	0.66	+0.7
3,232,328	-		Rru_A2797	0.66	+0.2
3,232,328	-		Rru_A2797	0.66	-0.0
3,232,340	-		Rru_A2797	0.68	-0.0
3,232,340	-		Rru_A2797	0.68	+1.8
3,232,599	+		Rru_A2798	0.16	-0.0
3,232,599	+		Rru_A2798	0.16	-1.0
3,232,604	+		Rru_A2798	0.17	+1.5
3,232,605	-		Rru_A2798	0.17	+0.4