Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2777

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,211,044	+		Rru_A2776	0.18	+1.8
3,211,044	+		Rru_A2776	0.18	-0.0
3,211,045	-		Rru_A2776	0.18	-0.1
3,211,123	-		Rru_A2776	0.28	+1.5
3,211,123	-		Rru_A2776	0.28	+0.2
3,211,206	+		Rru_A2776	0.39	-0.5
3,211,207	-		Rru_A2776	0.39	-0.4
3,211,449	+		Rru_A2776	0.70	-0.0
3,211,449	+		Rru_A2776	0.70	-0.3
3,211,450	-		Rru_A2776	0.71	-0.6
3,211,564	+		Rru_A2776	0.85	-0.0
3,211,564	+		Rru_A2776	0.85	-0.0
3,211,565	-		Rru_A2776	0.85	-0.0
3,211,666	+				-0.0
3,211,666	+				+0.0
3,211,667	-				-0.0
3,211,667	-				+0.9
3,211,667	-				-0.0
3,211,667	-				+1.5
3,211,667	-				-0.0
3,211,667	-				+0.9
3,211,698	+				-1.0
3,211,698	+				-3.0
3,211,704	+				-0.0
3,211,704	+				-0.0
3,211,907	+		Rru_A2777	0.18	-1.1
3,211,907	+		Rru_A2777	0.18	+0.6
3,211,907	+		Rru_A2777	0.18	-0.0
3,211,907	+		Rru_A2777	0.18	+0.7
3,211,908	-		Rru_A2777	0.18	-0.0
3,211,908	-		Rru_A2777	0.18	+0.6
3,211,908	-		Rru_A2777	0.18	+0.6
3,211,908	-		Rru_A2777	0.18	-0.9
3,211,908	-		Rru_A2777	0.18	-0.0
3,212,104	+		Rru_A2777	0.38	+0.7
3,212,104	+		Rru_A2777	0.38	-0.0
3,212,104	+		Rru_A2777	0.38	-0.0
3,212,105	-		Rru_A2777	0.38	+0.6
3,212,141	+		Rru_A2777	0.42	-1.0
3,212,285	+		Rru_A2777	0.57	-0.0
3,212,285	+		Rru_A2777	0.57	-1.0
3,212,285	+		Rru_A2777	0.57	+0.3
3,212,309	+		Rru_A2777	0.60	-0.0
3,212,309	+		Rru_A2777	0.60	+0.1
3,212,310	-		Rru_A2777	0.60	+0.1
3,212,319	-		Rru_A2777	0.61	-1.6
3,212,377	+		Rru_A2777	0.67	-0.0
3,212,519	+		Rru_A2777	0.81	-0.0
3,212,546	+		Rru_A2777	0.84	-0.0
3,212,547	-		Rru_A2777	0.84	+1.0
3,212,548	+		Rru_A2777	0.84	+0.6
3,212,548	+		Rru_A2777	0.84	-0.0
3,212,548	+		Rru_A2777	0.84	-0.0
3,212,548	+		Rru_A2777	0.84	-0.0
3,212,549	-		Rru_A2777	0.84	-0.9
3,212,549	-		Rru_A2777	0.84	+2.0
3,212,549	-		Rru_A2777	0.84	+0.7
3,212,549	-		Rru_A2777	0.84	+0.3
3,212,549	-		Rru_A2777	0.84	+0.3
3,212,549	-		Rru_A2777	0.84	+0.7
3,212,549	-		Rru_A2777	0.84	+0.3
3,212,552	+		Rru_A2777	0.85	+1.3
3,212,552	+		Rru_A2777	0.85	-1.0
3,212,552	+		Rru_A2777	0.85	-0.2
3,212,552	+		Rru_A2777	0.85	+1.6
3,212,553	-		Rru_A2777	0.85	+0.9
3,212,553	-		Rru_A2777	0.85	-0.0
3,212,586	-		Rru_A2777	0.88	-0.0
3,212,657	+				+0.1
3,212,657	+				-0.2
3,212,657	+				+0.6
3,212,657	+				-0.0
3,212,657	+				-0.0
3,212,657	+				+1.5
3,212,658	-				-0.0
3,212,658	-				+0.2
3,212,658	-				-1.0
3,212,658	-				-0.0
3,212,736	+				-0.0
3,212,747	+				+0.3
3,212,750	-				-0.0
3,212,774	+				-0.0
3,212,775	-				-0.0
3,212,775	-				+0.5
3,212,775	-				+1.0
3,212,775	-				+0.9
3,212,799	-				-1.6
3,212,854	+		Rru_A2778	0.27	+0.1
3,212,855	-		Rru_A2778	0.27	+0.3
3,212,855	-		Rru_A2778	0.27	+0.2
3,212,894	+		Rru_A2778	0.41	+0.3
3,212,894	+		Rru_A2778	0.41	-1.6
3,212,895	-		Rru_A2778	0.41	-0.0
3,213,057	+				-0.8
3,213,057	+				-0.6
3,213,058	-				+0.6
3,213,058	-				-2.4
3,213,063	+				+0.7
3,213,063	+				+0.0
3,213,064	-				-1.0
3,213,088	+				-0.2
3,213,447	+				+0.4
3,213,598	+				-0.0
3,213,598	+				-1.6
3,213,598	+				+0.9
3,213,599	-		Rru_A2780	0.10	+1.2
3,213,599	-		Rru_A2780	0.10	-1.6
3,213,599	-		Rru_A2780	0.10	+0.8