Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2774

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,206,692	+				-0.0
3,206,693	-				-3.2
3,206,693	-				-3.7
3,206,789	+				-0.0
3,206,813	+				-3.0
3,206,814	-				-0.0
3,206,814	-				+1.0
3,206,818	+				-1.6
3,206,819	-				-0.0
3,206,819	-				-0.3
3,206,896	-				+0.2
3,206,896	-				-0.0
3,206,896	-				+0.5
3,207,173	+		Rru_A2773	0.33	+0.2
3,207,173	+		Rru_A2773	0.33	-0.0
3,207,173	+		Rru_A2773	0.33	-0.3
3,207,603	+				-0.0
3,207,603	+				-0.4
3,207,603	+				+0.5
3,207,603	+				+0.4
3,207,603	+				-0.0
3,207,604	-				-0.0
3,207,604	-				-0.0
3,207,604	-				-0.0
3,207,604	-				+0.5
3,207,604	-				-0.0
3,207,604	-				-0.0
3,207,604	-				-2.4
3,207,607	+				+0.3
3,207,607	+				-0.7
3,207,608	-				-0.1
3,207,608	-				+0.1
3,207,634	+				+0.2
3,207,634	+				-0.0
3,207,782	+				-1.0
3,207,782	+				-0.0
3,207,782	+				+1.0
3,208,373	+		Rru_A2774	0.34	+0.6
3,208,555	-		Rru_A2774	0.42	-0.0
3,208,690	+		Rru_A2774	0.48	-1.6
3,208,690	+		Rru_A2774	0.48	+1.0
3,208,690	+		Rru_A2774	0.48	-0.0
3,208,690	+		Rru_A2774	0.48	+0.7
3,208,690	+		Rru_A2774	0.48	-0.0
3,208,690	+		Rru_A2774	0.48	+0.3
3,208,691	-		Rru_A2774	0.48	-0.0
3,208,691	-		Rru_A2774	0.48	-0.0
3,208,691	-		Rru_A2774	0.48	+0.2
3,208,691	-		Rru_A2774	0.48	-1.0
3,208,826	+		Rru_A2774	0.54	+0.4
3,208,826	+		Rru_A2774	0.54	-0.0
3,208,827	-		Rru_A2774	0.55	+0.6
3,208,958	+		Rru_A2774	0.61	-0.0
3,208,958	+		Rru_A2774	0.61	+2.3
3,208,958	+		Rru_A2774	0.61	-0.3
3,208,959	-		Rru_A2774	0.61	-0.0
3,208,959	-		Rru_A2774	0.61	-0.3
3,208,959	-		Rru_A2774	0.61	+0.0
3,208,959	-		Rru_A2774	0.61	+2.2
3,209,025	+		Rru_A2774	0.64	+1.0
3,209,026	-		Rru_A2774	0.64	+0.2
3,209,026	-		Rru_A2774	0.64	+0.8
3,209,249	+		Rru_A2774	0.74	+0.4
3,209,250	-		Rru_A2774	0.74	+0.8
3,209,250	-		Rru_A2774	0.74	-0.2
3,209,354	+		Rru_A2774	0.79	+0.3
3,209,671	+				+0.4
3,209,885	-				+0.3
3,209,971	+				-0.6
3,209,971	+				-0.0
3,209,971	+				+0.4
3,209,971	+				+0.5
3,209,972	-				-0.0
3,209,972	-				+2.1
3,209,972	-				+0.9
3,209,972	-				-0.0
3,209,972	-				-0.0
3,209,972	-				-0.0
3,209,973	+				-0.1
3,209,974	-				+0.7
3,210,012	-				-0.0
3,210,012	-				-1.4
3,210,012	-				+1.2
3,210,084	+				+0.0
3,210,085	-				-0.0
3,210,546	+		Rru_A2775	0.65	-0.0
3,210,546	+		Rru_A2775	0.65	-0.0
3,210,547	-		Rru_A2775	0.65	+1.5
3,210,570	+		Rru_A2775	0.68	+1.4
3,210,570	+		Rru_A2775	0.68	-0.0
3,210,571	-		Rru_A2775	0.68	-0.0
3,210,571	-		Rru_A2775	0.68	+1.9
3,210,571	-		Rru_A2775	0.68	+1.4
3,210,678	+		Rru_A2775	0.81	+2.0
3,210,679	-		Rru_A2775	0.81	+0.6
3,210,715	+		Rru_A2775	0.86	-0.2
3,210,716	-		Rru_A2775	0.86	-1.0
3,210,716	-		Rru_A2775	0.86	+0.2
3,210,717	+		Rru_A2775	0.86	+0.6
3,210,718	-		Rru_A2775	0.86	+1.1
3,210,718	-		Rru_A2775	0.86	+0.3
3,210,718	-		Rru_A2775	0.86	+0.6