Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2770
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,203,676 | + | -0.0 | |||
3,203,694 | + | -0.0 | |||
3,203,712 | + | -0.0 | |||
3,203,712 | + | -0.0 | |||
3,203,712 | + | -0.0 | |||
3,203,713 | - | -0.0 | |||
3,204,277 | - | Rru_A2770 | 0.10 | -0.0 | |
3,204,408 | - | Rru_A2770 | 0.37 | -3.0 | |
3,204,428 | + | Rru_A2770 | 0.42 | -0.0 | |
3,204,670 | - | -1.4 | |||
3,204,670 | - | -0.6 | |||
3,204,716 | - | +0.8 | |||
3,204,953 | + | Rru_A2771 | 0.18 | +1.4 | |
3,205,326 | - | Rru_A2771 | 0.47 | -0.0 | |
3,205,326 | - | Rru_A2771 | 0.47 | +0.4 | |
3,205,373 | - | Rru_A2771 | 0.50 | -3.4 | |
3,205,373 | - | Rru_A2771 | 0.50 | -0.0 | |
3,205,426 | + | Rru_A2771 | 0.55 | -0.0 | |
3,205,427 | - | Rru_A2771 | 0.55 | -0.0 | |
3,205,606 | + | Rru_A2771 | 0.68 | -4.0 | |
3,205,631 | - | Rru_A2771 | 0.70 | -0.0 | |
3,205,631 | - | Rru_A2771 | 0.70 | -0.0 | |
3,205,631 | - | Rru_A2771 | 0.70 | -0.0 |
Or see this region's nucleotide sequence