Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rru_A2759 and Rru_A2760 are separated by 332 nucleotides Rru_A2760 and Rru_A2761 are separated by 209 nucleotides
Rru_A2759: Rru_A2759 - Hybrid cluster protein (NCBI), at 3,190,931 to 3,192,580
_A2759
Rru_A2760: Rru_A2760 - hypothetical protein (NCBI), at 3,192,913 to 3,193,140
_A2760
Rru_A2761: Rru_A2761 - Acyltransferase 3 (NCBI), at 3,193,350 to 3,194,507
_A2761
Position (kb)
3192
3193
3194 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3191.917 kb on + strand, within Rru_A2759 at 3192.074 kb on - strand, within Rru_A2759 at 3192.090 kb on + strand, within Rru_A2759 at 3192.090 kb on + strand, within Rru_A2759 at 3192.091 kb on - strand, within Rru_A2759 at 3192.114 kb on + strand, within Rru_A2759 at 3192.114 kb on + strand, within Rru_A2759 at 3192.288 kb on + strand, within Rru_A2759 at 3192.289 kb on - strand, within Rru_A2759 at 3192.444 kb on + strand at 3192.444 kb on + strand at 3192.445 kb on - strand at 3192.450 kb on + strand at 3192.450 kb on + strand at 3192.450 kb on + strand at 3192.450 kb on + strand at 3192.450 kb on + strand at 3192.451 kb on - strand at 3192.451 kb on - strand at 3192.451 kb on - strand at 3192.570 kb on + strand at 3192.571 kb on - strand at 3192.571 kb on - strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.576 kb on + strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.577 kb on - strand at 3192.636 kb on + strand at 3192.914 kb on + strand at 3192.914 kb on + strand at 3192.914 kb on + strand at 3192.938 kb on + strand, within Rru_A2760 at 3193.185 kb on + strand at 3193.568 kb on - strand, within Rru_A2761 at 3193.863 kb on + strand, within Rru_A2761 at 3193.902 kb on - strand, within Rru_A2761 at 3193.945 kb on + strand, within Rru_A2761 at 3194.067 kb on + strand, within Rru_A2761
Per-strain Table
Position Strand Gene LocusTag Fraction acetate; Light intensity 9 uM remove 3,191,917 + Rru_A2759 0.60 -0.0 3,192,074 - Rru_A2759 0.69 -0.0 3,192,090 + Rru_A2759 0.70 -1.0 3,192,090 + Rru_A2759 0.70 +0.4 3,192,091 - Rru_A2759 0.70 -0.0 3,192,114 + Rru_A2759 0.72 +0.4 3,192,114 + Rru_A2759 0.72 -0.0 3,192,288 + Rru_A2759 0.82 -0.0 3,192,289 - Rru_A2759 0.82 +0.3 3,192,444 + -0.0 3,192,444 + -0.0 3,192,445 - -1.0 3,192,450 + -0.0 3,192,450 + +0.5 3,192,450 + -1.0 3,192,450 + +0.4 3,192,450 + +0.5 3,192,451 - +0.0 3,192,451 - +0.2 3,192,451 - -0.0 3,192,570 + +1.2 3,192,571 - -2.4 3,192,571 - +0.9 3,192,576 + +1.5 3,192,576 + +1.1 3,192,576 + -0.0 3,192,576 + -0.0 3,192,576 + -0.0 3,192,576 + -0.0 3,192,576 + +2.3 3,192,576 + +1.0 3,192,576 + +1.8 3,192,576 + +1.5 3,192,576 + +1.3 3,192,576 + +0.9 3,192,577 - +0.8 3,192,577 - -0.0 3,192,577 - -0.6 3,192,577 - -0.0 3,192,577 - -0.0 3,192,577 - +0.7 3,192,577 - -0.0 3,192,577 - +0.4 3,192,636 + +1.5 3,192,914 + -0.0 3,192,914 + +0.6 3,192,914 + -0.2 3,192,938 + Rru_A2760 0.11 +0.4 3,193,185 + -0.0 3,193,568 - Rru_A2761 0.19 -0.1 3,193,863 + Rru_A2761 0.44 -0.1 3,193,902 - Rru_A2761 0.48 -0.0 3,193,945 + Rru_A2761 0.51 -0.0 3,194,067 + Rru_A2761 0.62 -0.5
Or see this region's nucleotide sequence